CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	endoplasmic reticulum, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98920	Soybean	mitochondrion	94.75	95.83
KRH14479	Soybean	plasma membrane	73.36	72.41
KRH73656	Soybean	plasma membrane	71.48	70.69
VIT_12s0142g00040.t01	Wine grape	plasma membrane	68.86	68.73
PGSC0003DMT400044571	Potato	plasma membrane	62.85	61.58
Solyc07g056320.2.1	Tomato	plasma membrane	62.48	60.99
CDY06647	Canola	plasma membrane	59.1	55.17
CDY10206	Canola	plasma membrane	58.35	54.85
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	58.72	54.82
AT1G06520.1	Thale cress	plasma membrane	58.54	53.33
GSMUA_Achr8P27070_001	Banana	plastid	54.03	52.27
Zm00001d044136_P001	Maize	mitochondrion	50.28	49.17
TraesCS7D01G498800.1	Wheat	mitochondrion	46.9	48.64
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	47.84	48.02
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	48.22	47.95
TraesCS3A01G227400.1	Wheat	mitochondrion	48.22	47.95
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	47.84	47.57
Zm00001d011430_P001	Maize	mitochondrion	49.53	47.4
EES01127	Sorghum	mitochondrion	50.47	47.03
KRH55439	Soybean	plasma membrane	24.2	46.4
GSMUA_Achr3P16480_001	Banana	mitochondrion	44.28	46.37
KRH68291	Soybean	mitochondrion	43.53	45.58
KRH49307	Soybean	plasma membrane	42.4	45.56
KRH33389	Soybean	plasma membrane	43.15	45.19
KRG90133	Soybean	plasma membrane	43.15	44.92
KRH16642	Soybean	plasma membrane	41.84	44.87
KRH75836	Soybean	cytosol, plasma membrane, plastid	41.28	44.72
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	42.21	44.55
KRH66036	Soybean	plasma membrane	41.46	44.38
KRH18844	Soybean	plasma membrane	41.28	43.74
KRH48117	Soybean	plasma membrane	40.71	43.49
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	47.47	43.47
KRH64978	Soybean	plasma membrane	40.71	43.4
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	43.71	43.23
KRG88817	Soybean	plasma membrane	22.7	42.91
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	37.71	42.58
KRH15081	Soybean	cytosol	37.71	42.58
KRG96552	Soybean	plasma membrane	42.78	42.22
KRH00171	Soybean	plastid	42.59	42.12
Os01t0631400-01	Rice	mitochondrion	25.14	40.61
KRH69194	Soybean	golgi, plasma membrane, plastid	42.21	40.54
TraesCS3D01G225400.1	Wheat	mitochondrion	19.32	40.08
KRH31769	Soybean	golgi	41.28	39.57
TraesCS3A01G227500.1	Wheat	mitochondrion	18.2	39.11
TraesCSU01G235900.1	Wheat	extracellular, plasma membrane	21.58	38.46
TraesCS7A01G509500.1	Wheat	mitochondrion	18.95	37.55

Protein Annotations

EntrezGene:100786742	MapMan:5.2.1.3.1	EMBL:ACUP02005311	EnsemblPlantsGene:GLYMA_08G309200	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143
GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787
GO:GO:0016791	GO:GO:0090447	UniProt:I1KY15	EnsemblPlants:KRH46052	ProteinID:KRH46052	ProteinID:KRH46052.1
PFAM:PF01553	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593
TMHMM:TMhelix	UniParc:UPI0002338AF4	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:42817151..42820147

Molecular Weight (calculated)

60650.8 Da

IEP (calculated)

8.938

GRAVY (calculated)

0.141

Length

533 amino acids

Sequence
(BLAST)

001: MVSYLVPLRL ANWVMNQVLV KSCYGFSRKL KSLGFRWGDL SSKPLHQPSP FPNITKCDLE GRGSQTLACD FHKVLLRTHS FFPYFMLVAF EGGSIFRAFL
101: LLCSCPILWI LNYEMKLRVM IFISFCGLRM KDMDNTSRAV LPKFYLENLN LEAYEVVASV GSRVFFTTMP RVMVEGFLKE YLNADAVIAT ELHTAGCYFT
201: GFLSKSGLLV KHSALMDYFG DTKPDLGIGN ASLHDQLFVS LCKEAYVVIT EEGKVMPRNK YPKPLIFHDG RLAFLPTPSA TLFMFTWLPL GFLMAIYRIF
301: LGVFLCCKFT LALGIWSGLI LNFNDKNQQR SESNKGVLYV CSHRTLMDPI FLSIMLGRRL TAVTYSLSKV SELIAPIRTM RLTRDRKQDG ETMKRLLCEG
401: DLVVFPEGTT CREPYLLRFS SLFAELADEI VPVAMNAHVT MFYGTTASGL KVLDPIFFFM NPWPRYDIQV LEKVPRELTC AGGRSSHEVA NYIQRELADA
501: LGFECTNLKR RDKYMMLAGN EGVVQEKKGR RFC

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.