Factsheet for TraesCSU01G235900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G250600.1	Wheat	cytosol, extracellular	20.4	40.67
TraesCSU01G241800.1	Wheat	cytosol	20.07	40.54
TraesCS7D01G498800.1	Wheat	mitochondrion	66.89	38.91
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	68.56	38.61
Zm00001d044136_P001	Maize	mitochondrion	59.53	32.66
Zm00001d011430_P001	Maize	mitochondrion	60.54	32.5
EES01127	Sorghum	mitochondrion	59.53	31.12
GSMUA_Achr8P27070_001	Banana	plastid	45.82	24.86
PGSC0003DMT400044571	Potato	plasma membrane	44.48	24.45
Solyc07g056320.2.1	Tomato	plasma membrane	44.15	24.18
VIT_12s0142g00040.t01	Wine grape	plasma membrane	43.14	24.16
KRH14479	Soybean	plasma membrane	42.47	23.52
KRH73656	Soybean	plasma membrane	41.47	23.01
KRG98920	Soybean	mitochondrion	38.8	22.01
CDY10206	Canola	plasma membrane	41.14	21.69
KRH46052	Soybean	mitochondrion, plasma membrane	38.46	21.58
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	41.14	21.54
CDY06647	Canola	plasma membrane	41.14	21.54
AT1G06520.1	Thale cress	plasma membrane	41.14	21.03
GSMUA_Achr3P16480_001	Banana	mitochondrion	34.45	20.24
TraesCSU01G033700.1	Wheat	plastid	35.79	19.78
TraesCSU01G069100.1	Wheat	plastid	32.44	16.52
Os01t0631400-01	Rice	mitochondrion	9.03	8.18

Protein Annotations

EnsemblPlants:TraesCSU01G235900.1	EnsemblPlantsGene:TraesCSU01G235900	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	SMART:SM00563
SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:348868268..348869938

Molecular Weight (calculated)

32298.3 Da

IEP (calculated)

8.982

GRAVY (calculated)

0.067

Length

299 amino acids

Sequence
(BLAST)

001: MHAFFLFLPL GLVLSVIRIS IGIILPYKIS FAASAFFGIR FRTSGCPSTG AGAKPRGVLF VCAHRTLVHG VMLAGALQKP VSTVTYSLSR LSEILAPMKT
101: VRLTRDRDLD AKAISQLLEQ GDRAVCPEGT TCREPYLLRF SPLFAELADD MVPVALDAQV TLLYGTTTSG RKWLDPIAFL ANPAPSYRVE FLGPVPRDQT
201: RAGGRTGVEV ANWVQHRLGE ALAPAAEFEI SKEDDKGASK RAAIPKACSI LEPLSDPLIG IVVHHTQRLE DADGDHRLQL ASTGGKLLKE QGDKRSGVA

Best Arabidopsis Sequence Match ( AT1G02390.1 )
(BLAST)

001: MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE
101: MGLKTMVMLS FFGVKKESFR VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV GGYYLGIVED KKNLEIAFDK
201: VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY
301: SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV
401: VCPEGTTCRE PYLLRFSPLF SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR GVPDNGKVNF EVANHVQHEI
501: GNALGFECTN LTRRDKYLIL AGNNGVVKKK

Arabidopsis Description

GPAT2Probable glycerol-3-phosphate acyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ22]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.