Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06647 | Canola | plasma membrane | 84.79 | 86.87 |
| CDY10206 | Canola | plasma membrane | 83.76 | 86.42 |
| Bra015507.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 84.1 | 86.16 |
| VIT_12s0142g00040.t01 | Wine grape | plasma membrane | 57.78 | 63.3 |
| KRH14479 | Soybean | plasma membrane | 57.61 | 62.41 |
| KRH73656 | Soybean | plasma membrane | 57.27 | 62.15 |
| PGSC0003DMT400044571 | Potato | plasma membrane | 55.73 | 59.93 |
| Solyc07g056320.2.1 | Tomato | plasma membrane | 55.38 | 59.34 |
| KRG98920 | Soybean | mitochondrion | 53.16 | 59.01 |
| KRH46052 | Soybean | mitochondrion, plasma membrane | 53.33 | 58.54 |
| GSMUA_Achr8P27070_001 | Banana | plastid | 46.67 | 49.55 |
| Zm00001d044136_P001 | Maize | mitochondrion | 45.81 | 49.17 |
| TraesCS3A01G227400.1 | Wheat | mitochondrion | 44.96 | 49.07 |
| TraesCS3D01G225300.1 | Wheat | mitochondrion, plasma membrane | 44.79 | 48.88 |
| TraesCS3B01G257000.2 | Wheat | mitochondrion, plasma membrane | 44.62 | 48.69 |
| Zm00001d011430_P001 | Maize | mitochondrion | 45.81 | 48.11 |
| TraesCS7D01G498800.1 | Wheat | mitochondrion | 41.37 | 47.08 |
| TraesCS7B01G419500.1 | Wheat | mitochondrion, plasma membrane | 42.73 | 47.08 |
| EES01127 | Sorghum | mitochondrion | 45.3 | 46.33 |
| HORVU3Hr1G056830.3 | Barley | cytosol, plasma membrane | 43.76 | 43.99 |
| Os01t0631400-01 | Rice | mitochondrion | 24.79 | 43.94 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 37.27 | 43.51 |
| GSMUA_Achr3P16480_001 | Banana | mitochondrion | 37.78 | 43.42 |
| AT1G01610.1 | Thale cress | plasma membrane | 36.41 | 42.35 |
| AT1G02390.1 | Thale cress | plasma membrane | 38.29 | 42.26 |
| AT4G00400.1 | Thale cress | cytosol, golgi, plasma membrane | 35.9 | 42.0 |
| AT3G11430.1 | Thale cress | plasma membrane | 35.73 | 41.63 |
| TraesCSU01G235900.1 | Wheat | extracellular, plasma membrane | 21.03 | 41.14 |
| AT5G06090.1 | Thale cress | plasma membrane | 34.87 | 40.8 |
| TraesCS3D01G225400.1 | Wheat | mitochondrion | 17.78 | 40.47 |
| AT3G11325.2 | Thale cress | endoplasmic reticulum, plasma membrane | 26.5 | 39.44 |
| TraesCS3A01G227500.1 | Wheat | mitochondrion | 16.58 | 39.11 |
| AT4G01950.2 | Thale cress | cytosol, golgi, peroxisome | 36.41 | 38.87 |
| TraesCS7A01G509500.1 | Wheat | mitochondrion | 16.58 | 36.06 |
Protein Annotations
| MapMan:5.2.1.3.1 | EntrezGene:837163 | ProteinID:AAF24816.1 | ProteinID:AEE28001.1 | EMBL:AK229141 | ArrayExpress:AT1G06520 |
| EnsemblPlantsGene:AT1G06520 | RefSeq:AT1G06520 | TAIR:AT1G06520 | RefSeq:AT1G06520-TAIR-G | EnsemblPlants:AT1G06520.1 | TAIR:AT1G06520.1 |
| Symbol:ATGPAT1 | EMBL:AY088785 | EMBL:BT033096 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004366 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008654 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010143 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016024 |
| GO:GO:0016311 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0030154 |
| GO:GO:0048235 | GO:GO:0080167 | GO:GO:0090447 | GO:GO:0102420 | RefSeq:NP_563768.1 | PFAM:PF01553 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF44 |
| InterPro:Plipid/glycerol_acylTrfase | UniProt:Q0WPD4 | UniProt:Q9SHJ5 | SMART:SM00563 | SUPFAM:SSF69593 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000A5ED6 | SEG:seg | : | : | : |
Description
GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
Coordinates
chr1:-:1993903..1996355
Molecular Weight (calculated)
66518.1 Da
IEP (calculated)
9.471
GRAVY (calculated)
-0.020
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.