Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38016 | Canola | plasma membrane | 95.83 | 95.45 |
| CDY15166 | Canola | plasma membrane | 95.03 | 95.03 |
| Bra032643.1-P | Field mustard | plasma membrane | 94.63 | 95.01 |
| Bra033249.1-P | Field mustard | plasma membrane | 88.87 | 94.9 |
| CDX90045 | Canola | plasma membrane | 94.43 | 94.43 |
| AT4G00400.1 | Thale cress | cytosol, golgi, plasma membrane | 90.06 | 90.6 |
| KRH48117 | Soybean | plasma membrane | 80.12 | 80.76 |
| KRH64978 | Soybean | plasma membrane | 78.73 | 79.2 |
| VIT_15s0046g02400.t01 | Wine grape | plasma membrane | 78.13 | 78.44 |
| Solyc01g094700.2.1 | Tomato | plasma membrane | 75.94 | 76.25 |
| PGSC0003DMT400000152 | Potato | plasma membrane | 75.94 | 76.25 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 61.83 | 62.08 |
| GSMUA_Achr1P06780_001 | Banana | plasma membrane | 49.5 | 60.73 |
| TraesCS6D01G043000.1 | Wheat | mitochondrion | 55.67 | 55.45 |
| TraesCS6B01G051800.1 | Wheat | mitochondrion | 55.07 | 54.64 |
| TraesCS6A01G037400.1 | Wheat | endoplasmic reticulum | 54.67 | 54.24 |
| EES04353 | Sorghum | plastid | 55.67 | 54.05 |
| TraesCS6B01G052300.1 | Wheat | mitochondrion | 53.68 | 53.15 |
| Zm00001d014984_P001 | Maize | endoplasmic reticulum | 54.08 | 52.82 |
| Os02t0114400-00 | Rice | mitochondrion | 21.67 | 47.81 |
| AT3G11430.1 | Thale cress | plasma membrane | 46.32 | 46.41 |
| AT5G06090.1 | Thale cress | plasma membrane | 44.53 | 44.8 |
| HORVU6Hr1G006810.7 | Barley | mitochondrion | 54.47 | 43.7 |
| AT3G11325.2 | Thale cress | endoplasmic reticulum, plasma membrane | 33.6 | 43.0 |
| AT1G02390.1 | Thale cress | plasma membrane | 39.76 | 37.74 |
| AT1G06520.1 | Thale cress | plasma membrane | 42.35 | 36.41 |
| AT4G01950.2 | Thale cress | cytosol, golgi, peroxisome | 39.16 | 35.95 |
Protein Annotations
| MapMan:21.9.1.5.1 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | EntrezGene:839297 | UniProt:A0A178W9F8 | ProteinID:AAF81319.1 |
| ProteinID:AEE27311.1 | ArrayExpress:AT1G01610 | EnsemblPlantsGene:AT1G01610 | RefSeq:AT1G01610 | TAIR:AT1G01610 | RefSeq:AT1G01610-TAIR-G |
| EnsemblPlants:AT1G01610.1 | TAIR:AT1G01610.1 | Symbol:ATGPAT4 | EMBL:AY062466 | EMBL:AY093294 | Unigene:At.22475 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008654 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010143 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016311 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0090447 |
| GO:GO:0102419 | InterPro:HAD_sf | InterPro:IPR023214 | RefSeq:NP_171667.1 | ProteinID:OAP14988.1 | PFAM:PF01553 |
| PFAM:PF12710 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF27 |
| InterPro:Plipid/glycerol_acylTrfase | UniProt:Q9LMM0 | SMART:SM00563 | SUPFAM:SSF69593 | TMHMM:TMhelix | UniParc:UPI00000A1D4B |
| SEG:seg | : | : | : | : | : |
Description
GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
Coordinates
chr1:-:221642..224351
Molecular Weight (calculated)
56265.3 Da
IEP (calculated)
9.485
GRAVY (calculated)
0.096
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.