Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71876 | Canola | cytosol, extracellular, mitochondrion | 30.6 | 93.29 |
| Bra037338.1-P | Field mustard | plasma membrane | 90.6 | 90.6 |
| AT1G01610.1 | Thale cress | plasma membrane | 90.6 | 90.06 |
| KRH48117 | Soybean | plasma membrane | 81.0 | 81.16 |
| KRH64978 | Soybean | plasma membrane | 79.4 | 79.4 |
| VIT_15s0046g02400.t01 | Wine grape | plasma membrane | 77.8 | 77.64 |
| Solyc01g094700.2.1 | Tomato | plasma membrane | 75.0 | 74.85 |
| PGSC0003DMT400000152 | Potato | plasma membrane | 75.0 | 74.85 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 62.0 | 61.88 |
| GSMUA_Achr1P06780_001 | Banana | plasma membrane | 50.0 | 60.98 |
| TraesCS6D01G043000.1 | Wheat | mitochondrion | 54.8 | 54.26 |
| EES04353 | Sorghum | plastid | 56.0 | 54.05 |
| TraesCS6B01G051800.1 | Wheat | mitochondrion | 54.6 | 53.85 |
| TraesCS6A01G037400.1 | Wheat | endoplasmic reticulum | 54.2 | 53.45 |
| TraesCS6B01G052300.1 | Wheat | mitochondrion | 53.2 | 52.36 |
| Zm00001d014984_P001 | Maize | endoplasmic reticulum | 53.6 | 52.04 |
| Os02t0114400-00 | Rice | mitochondrion | 22.6 | 49.56 |
| AT3G11430.1 | Thale cress | plasma membrane | 45.6 | 45.42 |
| AT5G06090.1 | Thale cress | plasma membrane | 44.2 | 44.2 |
| HORVU6Hr1G006810.7 | Barley | mitochondrion | 54.2 | 43.22 |
| AT3G11325.2 | Thale cress | endoplasmic reticulum, plasma membrane | 32.4 | 41.22 |
| AT1G02390.1 | Thale cress | plasma membrane | 39.6 | 37.36 |
| AT4G01950.2 | Thale cress | cytosol, golgi, peroxisome | 39.4 | 35.95 |
| AT1G06520.1 | Thale cress | plasma membrane | 42.0 | 35.9 |
Protein Annotations
| MapMan:21.9.1.5.1 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | EntrezGene:828140 | ProteinID:AAB62826.1 | ProteinID:AAB62827.1 |
| ProteinID:AAF02784.1 | ProteinID:AAF02785.1 | ProteinID:AEE81873.1 | EMBL:AK228870 | ArrayExpress:AT4G00400 | EnsemblPlantsGene:AT4G00400 |
| RefSeq:AT4G00400 | TAIR:AT4G00400 | RefSeq:AT4G00400-TAIR-G | EnsemblPlants:AT4G00400.1 | TAIR:AT4G00400.1 | Unigene:At.34564 |
| EMBL:BT015813 | ProteinID:CAB80798.1 | ProteinID:CAB80799.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004366 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008654 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010143 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016024 | GO:GO:0016311 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016787 | GO:GO:0016791 | GO:GO:0090447 | GO:GO:0102420 | Symbol:GPAT8 | InterPro:HAD_sf |
| InterPro:IPR023214 | RefSeq:NP_191950.2 | PFAM:PF01553 | PFAM:PF12710 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF27 |
| InterPro:Plipid/glycerol_acylTrfase | UniProt:Q5XF03 | SMART:SM00563 | SUPFAM:SSF69593 | TMHMM:TMhelix | UniParc:UPI000034F0E6 |
| SEG:seg | : | : | : | : | : |
Description
GPAT8Probable glycerol-3-phosphate acyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF03]
Coordinates
chr4:-:173953..176870
Molecular Weight (calculated)
55870.7 Da
IEP (calculated)
9.311
GRAVY (calculated)
0.066
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPEKKSQNF PPITECRDGE YDSIAADLDG TLLLSRSSFP YFMLVAVEAG SLLRGLILLL SLPFVIISYL FVSESLGIQI LIFISFAGLK IRDIELVSRA
101: VLPRFYAADV RKDSFEVFDK CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA ILKEFGNESP DLGLGDRTSD
201: HDFMSLCKKG YMVHATKSAT TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY EMLGIHLTIR GHRPPPPSPG
301: TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV
401: AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK
101: VLPRFYAADV RKDSFEVFDK CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA ILKEFGNESP DLGLGDRTSD
201: HDFMSLCKKG YMVHATKSAT TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY EMLGIHLTIR GHRPPPPSPG
301: TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV
401: AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.