Factsheet for TraesCS6A01G037400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G043000.1	Wheat	mitochondrion	95.27	95.64
TraesCS6B01G052300.1	Wheat	mitochondrion	93.69	93.5
Zm00001d014984_P001	Maize	endoplasmic reticulum	80.87	79.61
EES04353	Sorghum	plastid	80.87	79.15
HORVU6Hr1G006810.7	Barley	mitochondrion	93.69	75.76
Os02t0114400-00	Rice	mitochondrion	32.94	73.25
CDY71876	Canola	cytosol, extracellular, mitochondrion	19.72	60.98
GSMUA_Achr1P06780_001	Banana	plasma membrane	49.31	60.98
KRH48117	Soybean	plasma membrane	55.62	56.51
KRH64978	Soybean	plasma membrane	55.62	56.4
TraesCS4A01G021500.1	Wheat	peroxisome	54.83	55.6
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	54.24	55.33
PGSC0003DMT400000152	Potato	plasma membrane	54.64	55.29
VIT_15s0046g02400.t01	Wine grape	plasma membrane	54.44	55.09
Bra033249.1-P	Field mustard	plasma membrane	51.08	54.99
Solyc01g094700.2.1	Tomato	plasma membrane	54.24	54.89
Bra037338.1-P	Field mustard	plasma membrane	54.04	54.8
AT1G01610.1	Thale cress	plasma membrane	54.24	54.67
Bra032643.1-P	Field mustard	plasma membrane	53.65	54.29
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	53.45	54.2
CDY38016	Canola	plasma membrane	53.85	54.06
CDX90045	Canola	plasma membrane	53.45	53.88
CDY15166	Canola	plasma membrane	53.45	53.88
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.69	50.29
TraesCS4A01G248400.1	Wheat	plasma membrane	50.69	50.2
TraesCS1A01G278700.1	Wheat	plastid	52.86	48.99
TraesCS1A01G283100.1	Wheat	plasma membrane	44.58	44.05
TraesCS2A01G015700.1	Wheat	mitochondrion	47.53	41.48
TraesCS4A01G171600.1	Wheat	mitochondrion	35.5	40.09
TraesCS5A01G086200.1	Wheat	plasma membrane	42.01	39.44
TraesCS3A01G339700.1	Wheat	mitochondrion	41.22	38.63
TraesCS3A01G227400.1	Wheat	mitochondrion	39.45	37.31
TraesCS2A01G134500.1	Wheat	mitochondrion	38.46	37.0
TraesCS2A01G329800.1	Wheat	mitochondrion	36.09	36.17
TraesCS4A01G361400.1	Wheat	mitochondrion	39.45	35.91
TraesCS3A01G147200.1	Wheat	plastid	35.11	35.32
TraesCS1A01G220600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	34.71	35.2
TraesCS3A01G146100.1	Wheat	mitochondrion	36.09	34.08
TraesCS3A01G227500.1	Wheat	mitochondrion	13.61	27.82
TraesCS7A01G509500.1	Wheat	mitochondrion	13.81	26.02

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G037400	EnsemblPlants:TraesCS6A01G037400.1	TIGR:cd06551
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:18520226..18522461

Molecular Weight (calculated)

54023.7 Da

IEP (calculated)

9.196

GRAVY (calculated)

0.234

Length

507 amino acids

Sequence
(BLAST)

001: MAPRATTAMS RFPPVSSYDA AARERRTAAS DLDGTLLASS SAFPYYFLVA LEAGGYLRAL ALLLLAPFIL LLYTAFSEPA AIGLLVFATF AGLRVRDVEA
101: VARGVLPRHY AAGVRADSWE VFRGCGAGRR VVVTASPAVM VAPFVREFLG AEVAGTELGT CCGRFTGLIS GGVLVAGRKR EVVERLFAGG DMPDVGLGDR
201: ESDHDFMAIC KEAYMVPTDK RAPRAAADAL LSRVVFHDGR LVRRPDPAHA LFALAYLPVG FALAVLRVLI SLPVPPHLVR HTYRLTGIRL AVRGTPPPAP
301: RGGSPGSLLV CNHRTALDPI IVAVALGRPV TCVTYSVSRV STAISPIPAV ALARDREADA ARIAELLASG RDVVVCPEGT TCREPCLLRF SALFAELTDR
401: IVPVALEAAQ STYYGSTATG WKAMDPWFFY MNPRPGYKVT FLPALRPEET CGGGGRSAVD VANHVQAVIA KELGYRCTAL TRKDKYMKLT GNDGTVAAAG
501: DDGKKFA

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.