Factsheet for TraesCS6D01G043000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G051800.1	Wheat	mitochondrion	96.24	95.86
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	95.64	95.27
EES04353	Sorghum	plastid	80.59	78.57
Zm00001d014984_P001	Maize	endoplasmic reticulum	80.0	78.45
HORVU6Hr1G006810.7	Barley	mitochondrion	93.27	75.12
Os02t0114400-00	Rice	mitochondrion	32.48	71.93
CDY71876	Canola	cytosol, extracellular, mitochondrion	20.4	62.8
GSMUA_Achr1P06780_001	Banana	plasma membrane	49.11	60.49
KRH48117	Soybean	plasma membrane	56.44	57.11
KRH64978	Soybean	plasma membrane	56.44	57.0
TraesCS4D01G280800.1	Wheat	peroxisome	56.04	56.6
PGSC0003DMT400000152	Potato	plasma membrane	56.04	56.49
Solyc01g094700.2.1	Tomato	plasma membrane	55.84	56.29
VIT_15s0046g02400.t01	Wine grape	plasma membrane	55.64	56.09
Bra033249.1-P	Field mustard	plasma membrane	52.28	56.05
AT1G01610.1	Thale cress	plasma membrane	55.45	55.67
Bra037338.1-P	Field mustard	plasma membrane	54.85	55.4
Bra032643.1-P	Field mustard	plasma membrane	54.85	55.29
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	54.26	55.13
CDY38016	Canola	plasma membrane	55.05	55.05
CDY15166	Canola	plasma membrane	54.65	54.87
CDX90045	Canola	plasma membrane	54.65	54.87
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	54.26	54.8
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.69	50.1
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	50.49	49.9
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	52.28	47.91
TraesCS1D01G282300.1	Wheat	plasma membrane	45.15	44.19
TraesCS5D01G099700.1	Wheat	plasma membrane	41.98	39.55
TraesCS4D01G143600.1	Wheat	mitochondrion	43.37	39.32
TraesCS7D01G498800.1	Wheat	mitochondrion	38.81	38.13
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	40.2	37.87
TraesCS3D01G333200.1	Wheat	mitochondrion	40.59	37.82
TraesCS2D01G136700.1	Wheat	mitochondrion	38.22	36.55
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	36.44	36.36
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	34.26	35.6
TraesCS5D01G512000.1	Wheat	mitochondrion	38.42	34.46
TraesCS3D01G155000.1	Wheat	mitochondrion	36.04	33.89
TraesCS3D01G225400.1	Wheat	mitochondrion	15.25	29.96

Protein Annotations

EnsemblPlants:TraesCS6D01G043000.1	EnsemblPlantsGene:TraesCS6D01G043000	Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD_sf	InterPro:IPR023214
InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	PFAM:PF01553	PFAM:PF12710	SEG:seg
SMART:SM00563	SUPFAM:SSF69593	TIGR:cd06551	TMHMM:TMhelix	MapMan:5.2.1.2.2	:

Description

No Description!

Coordinates

chr6D:+:17826930..17829289

Molecular Weight (calculated)

53790.3 Da

IEP (calculated)

8.949

GRAVY (calculated)

0.220

Length

505 amino acids

Sequence
(BLAST)

001: MAPRGTAAMS RFPPLSSYDA SARERRTAAS DLDGTLLASS SAFPYYFLVA LEAGGYLRAL ALLLLAPFIL LLYTAVSEPA AIGLLVFATF AGLRVRDVEA
101: VARGVLPRHY AAGVRADSWE VFRGCGAGRR VVVTASPAVM VSPFVREFLG AEVAGTELGA CCGRFTGLIS GGVLVAGRKR EVVERLFAGG DMPDVGLGDR
201: ESDHDFMAIC KEAYMVPTNK SAPRVAADAL LSSVVFHDGR LVRRPDPAQA LFALAYLPVG FALAVFRVLI SLPVPPHLVR HTYRLTGIRL AVQGTPPPAP
301: REGSPGSLLV CNHRTALDPI IVAVALGRPV TCVTYSVSRL STAISPIPAV ALARDREADA ARIGELLASG RDVVVCPEGT TCREPCLLRF SALFAELTDR
401: IVPVALDAAQ STYYGSTARG WKAMDPWFFY MNPRPGYKVT FLPALRPEET CGGGGRSAVD VANHVQAVIG KELGYRCTTL TRKDKYMKLA GNDGTVAGDD
501: GKKFA

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.