Factsheet for TraesCS1D01G132800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	99.02	99.02
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	98.83	98.83
HORVU1Hr1G032150.4	Barley	peroxisome	95.69	90.56
EER91628	Sorghum	cytosol	81.02	79.92
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	80.63	79.08
TraesCS4D01G280800.1	Wheat	peroxisome	70.84	72.4
PGSC0003DMT400073428	Potato	cytosol	41.1	69.54
Os10t0413400-00	Rice	plastid	82.97	68.72
VIT_01s0026g01210.t01	Wine grape	plasma membrane	66.14	67.2
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	66.73	66.73
KRH33389	Soybean	plasma membrane	66.14	66.4
PGSC0003DMT400007387	Potato	plasma membrane	64.97	66.14
KRG90133	Soybean	plasma membrane	65.75	65.62
Solyc04g005840.1.1	Tomato	plasma membrane	63.99	65.53
PGSC0003DMT400003553	Potato	plasma membrane	61.45	65.42
Solyc02g087500.1.1	Tomato	plasma membrane	63.41	63.78
PGSC0003DMT400091384	Potato	plasma membrane	63.21	63.58
PGSC0003DMT400028782	Potato	plasma membrane	57.14	59.23
PGSC0003DMT400028781	Potato	plasma membrane	56.36	58.3
Solyc10g084900.1.1	Tomato	plasma membrane	52.45	55.14
PGSC0003DMT400028779	Potato	plasma membrane	23.87	54.46
PGSC0003DMT400028775	Potato	plasma membrane	52.05	54.4
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	52.25	53.72
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	49.71	50.9
TraesCS6D01G043000.1	Wheat	mitochondrion	50.1	50.69
TraesCS1D01G282300.1	Wheat	plasma membrane	47.95	47.48
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	50.49	46.82
TraesCS7D01G498800.1	Wheat	mitochondrion	41.49	41.25
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	42.86	40.86
TraesCS5D01G099700.1	Wheat	plasma membrane	42.66	40.67
TraesCS3D01G333200.1	Wheat	mitochondrion	39.92	37.64
TraesCS4D01G143600.1	Wheat	mitochondrion	40.12	36.8
TraesCS2D01G136700.1	Wheat	mitochondrion	37.57	36.36
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	34.25	36.01
TraesCS5D01G512000.1	Wheat	mitochondrion	39.53	35.88
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	35.42	35.77
TraesCS3D01G155000.1	Wheat	mitochondrion	36.59	34.82
TraesCS3D01G225400.1	Wheat	mitochondrion	14.68	29.18

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G132800	EnsemblPlants:TraesCS1D01G132800.1	TIGR:cd06551
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:159903164..159906243

Molecular Weight (calculated)

55265.3 Da

IEP (calculated)

9.243

GRAVY (calculated)

0.202

Length

511 amino acids

Sequence
(BLAST)

001: MESLLAAAAA GVEPFPSVDK CDASGRGSHA VAADLDGTLL RSRSPFPYYA LVAFETGGWP RLLLLLLLAP LATLLGIAAS EAAAVRVLVF AATAGARVSS
101: IESAAQAVLP RFYAADVHPG AWRVFSACSR RRVVLTSTPR IMAEPFLREC LGADAVAGTE LATWRGRATG MVHTRRGVLV GRRKAEALHE IFDEDGDVPD
201: VGLGDRRSDY PFMCQCKEAY IVPSAPVEAV SMDQLRRQVI FHDGRLALRP TPLAALLTVL WCPAGFVLAC LRIAAGALLP MPWVYYAFWA LGVRVVVKGS
301: PPPRAGSTAG RTGVLFACSH RTLLDPIFLS AALGRPVAAV TYSLSRLSEM LSPIRTVRLS RNRVTDAAMI TRLLQEGDLA ICPEGTTSRE PFLLRFSALF
401: AELTDEVVPV AMESRMGMFH GTTARGWKGM DPFYFFMNPS PLYTVTFLSK LPSELTCSSG GRPSHEVANY IQRLIAATLS YQCTSLTRKD KYRALAGNDG
501: IVDVKPMNKA R

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.