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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 2
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G132800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.83 98.83
TraesCS1B01G149600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.63 98.63
HORVU1Hr1G032150.4 Barley peroxisome 95.11 90.0
EER91628 Sorghum cytosol 81.02 79.92
Zm00001d032973_P001 Maize cytosol, peroxisome, plasma membrane 80.63 79.08
TraesCS4A01G021500.1 Wheat peroxisome 71.23 72.8
PGSC0003DMT400073428 Potato cytosol 41.29 69.87
Os10t0413400-00 Rice plastid 83.37 69.04
VIT_01s0026g01210.t01 Wine grape plasma membrane 66.54 67.59
TraesCS4A01G248400.1 Wheat plasma membrane 67.32 67.19
KRH33389 Soybean plasma membrane 66.54 66.8
PGSC0003DMT400007387 Potato plasma membrane 65.56 66.73
Solyc04g005840.1.1 Tomato plasma membrane 64.58 66.13
KRG90133 Soybean plasma membrane 66.14 66.02
PGSC0003DMT400003553 Potato plasma membrane 61.84 65.83
Solyc02g087500.1.1 Tomato plasma membrane 63.8 64.17
PGSC0003DMT400091384 Potato plasma membrane 63.6 63.98
PGSC0003DMT400028782 Potato plasma membrane 57.53 59.63
PGSC0003DMT400028781 Potato plasma membrane 56.75 58.7
Solyc10g084900.1.1 Tomato plasma membrane 52.84 55.56
PGSC0003DMT400028779 Potato plasma membrane 24.07 54.91
PGSC0003DMT400028775 Potato plasma membrane 52.45 54.81
TraesCS3A01G368400.1 Wheat cytosol, peroxisome, plasma membrane 52.45 53.92
TraesCS2A01G015700.1 Wheat mitochondrion 61.06 53.7
VIT_14s0066g02150.t01 Wine grape golgi, plasma membrane, plastid 49.71 50.9
TraesCS6A01G037400.1 Wheat endoplasmic reticulum 50.29 50.69
TraesCS1A01G283100.1 Wheat plasma membrane 48.53 48.34
TraesCS1A01G278700.1 Wheat plastid 51.66 48.26
TraesCS3A01G227400.1 Wheat mitochondrion 42.86 40.86
TraesCS5A01G086200.1 Wheat plasma membrane 42.66 40.37
TraesCS4A01G171600.1 Wheat mitochondrion 34.64 39.42
TraesCS3A01G339700.1 Wheat mitochondrion 40.51 38.26
TraesCS4A01G361400.1 Wheat mitochondrion 40.12 36.8
TraesCS2A01G134500.1 Wheat mitochondrion 37.77 36.62
TraesCS1A01G220600.1 Wheat extracellular, mitochondrion, plasma membrane, plastid 35.03 35.8
TraesCS2A01G329800.1 Wheat mitochondrion 35.23 35.57
TraesCS3A01G146100.1 Wheat mitochondrion 37.38 35.57
TraesCS3A01G147200.1 Wheat plastid 35.03 35.52
TraesCS7A01G509500.1 Wheat mitochondrion 15.46 29.37
TraesCS3A01G227500.1 Wheat mitochondrion 13.31 27.42
Protein Annotations
Gene3D:1.20.1440.100MapMan:26.9.3.2Gene3D:3.40.50.1000MapMan:5.2.1.2.2GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016746InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214PFAM:PF01553PFAM:PF12710PANTHER:PTHR15486PANTHER:PTHR15486:SF7InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563SUPFAM:SSF56784SUPFAM:SSF69593TMHMM:TMhelixEnsemblPlantsGene:TraesCS1A01G139200EnsemblPlants:TraesCS1A01G139200.1
TIGR:cd06551SEG:seg::::
Description
No Description!
Coordinates
chr1A:+:234796415..234799414
Molecular Weight (calculated)
55222.3 Da
IEP (calculated)
9.374
GRAVY (calculated)
0.223
Length
511 amino acids
Sequence
(BLAST)
001: MESLLAAVAA GVEPFPSVDK CDASGRGSHA VAADLDGTLL RSRSPFPYYA LVAFETGGWP RLLLLLLLAP LATLLGIAVS EAAAVRVLVF AATAGARVSS
101: IESAAQAVLP RFYAADVHPG AWRVFSACSR RRVVLTSTPR IMAEPFLREC LGADAVAGTE LATWRGRATG MVQTRRGVLV GRRKAEALHE IFGEDGDVPD
201: VGLGDRRSDY PFMCQCKEAY IVPSAPVEAV SMDQLRRQVI FHDGRLALRP TPLAALLTVL WCPAGFVLAC LRIAAGALLP MPWVYYAFWA LGVRVVVKGS
301: PPPRAGSTAG RTGVLFACSH RTLLDPIFLS AALGRPVAAV TYSLSRLSEI LSPIRTVRLS RNRVTDAAMI TRLLQEGDLA ICPEGTTSRE PFLLRFSALF
401: AELTDEVVPV AMESRMGMFH GTTARGWKGM DPFYFFMNPS PVYTVTFLSK LPSELTCSSG GRPSHEVANY IQRLIAATLS YQCTSLTRKD KYRALAGNDG
501: IVDVKPMNKA R
Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)
001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
Arabidopsis Description
GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.