Factsheet for PGSC0003DMT400073428

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003553	Potato	plasma membrane	99.34	62.5
PGSC0003DMT400091384	Potato	plasma membrane	99.34	59.06
Solyc02g087500.1.1	Tomato	plasma membrane	96.03	57.09
PGSC0003DMT400007387	Potato	plasma membrane	81.13	48.8
EER90914	Sorghum	plasma membrane	76.82	45.94
Zm00001d033915_P001	Maize	plasma membrane	76.49	45.21
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	58.94	44.95
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	74.5	44.03
TraesCS4A01G248400.1	Wheat	plasma membrane	74.17	43.75
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	73.51	42.61
EER91628	Sorghum	cytosol	72.85	42.47
PGSC0003DMT400028782	Potato	plasma membrane	68.87	42.19
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	73.84	42.0
PGSC0003DMT400028781	Potato	plasma membrane	68.54	41.9
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.87	41.29
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.87	41.29
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.54	41.1
TraesCS4B01G066500.1	Wheat	plasma membrane	73.84	40.92
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	65.56	38.75
TraesCS4B01G282100.1	Wheat	peroxisome	62.91	38.0
HORVU1Hr1G032150.4	Barley	peroxisome	67.88	37.96
TraesCS4D01G280800.1	Wheat	peroxisome	62.58	37.8
TraesCS4A01G021500.1	Wheat	peroxisome	61.92	37.4
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	62.25	37.15
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	63.91	36.83
PGSC0003DMT400028775	Potato	plasma membrane	59.6	36.81
TraesCS2A01G015700.1	Wheat	mitochondrion	69.87	36.32
HORVU4Hr1G074470.4	Barley	plastid	62.58	36.07
HORVU4Hr1G011110.4	Barley	plastid	74.17	35.9
Os10t0413400-00	Rice	plastid	70.53	34.52
PGSC0003DMT400052335	Potato	cytosol	54.97	32.81
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	43.05	32.42
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	50.66	30.66
PGSC0003DMT400000152	Potato	plasma membrane	50.66	30.54
PGSC0003DMT400044571	Potato	plasma membrane	51.99	28.86
GSMUA_Achr5P14930_001	Banana	plasma membrane	64.57	26.64
PGSC0003DMT400069796	Potato	plasma membrane	50.66	20.48
Os03t0166600-00	Rice	cytosol	5.63	6.77
PGSC0003DMT400028779	Potato	plasma membrane	4.97	6.7

Protein Annotations

EntrezGene:102587518	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	UniProt:M1CRZ6
PFAM:PF01553	EnsemblPlantsGene:PGSC0003DMG400028523	PGSC:PGSC0003DMG400028523	EnsemblPlants:PGSC0003DMT400073428	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000295C196	RefSeq:XP_015168247.1

Description

Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028523]

Coordinates

chr6:+:50034760..50035668

Molecular Weight (calculated)

33589.4 Da

IEP (calculated)

9.725

GRAVY (calculated)

0.057

Length

302 amino acids

Sequence
(BLAST)

001: MQESYIVPPE PGVKPMSQDK LPKPIVFHDG RLVQKPSPLM ALIIILWIPV GFLLACLRIA AGTLLPMPLV YYAFWSLGVR VIIKGNPPPP ARKSTGQTGV
101: LFISSHRTLL DPIFLSTALG RPIPAVTYSL SRLSEIISPI KTVRLSRDRI TDANMIKKLL QEGDLVICPE GTTCREPFLL RFSALFAELT NELVPVAMCN
201: KMSMFHGTTA RGWKGMDPFY FFMNPSPSYE VNFLNKWPYE LTCKAGKSSH DVANYIQRTI AATLSYECTN FTRKDKYMAL AGNDGTVTTK SEFASKKVTT
301: GC

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.