CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	88.36	91.5
TraesCS4D01G280800.1	Wheat	peroxisome	73.66	77.2
TraesCS4B01G282100.1	Wheat	peroxisome	72.9	76.4
TraesCS4A01G021500.1	Wheat	peroxisome	72.14	75.6
Os03t0166600-00	Rice	cytosol	36.07	75.3
EER91628	Sorghum	cytosol	72.9	73.75
HORVU4Hr1G074470.4	Barley	plastid	73.47	73.47
EER90914	Sorghum	plasma membrane	64.31	66.73
PGSC0003DMT400073428	Potato	cytosol	36.83	63.91
PGSC0003DMT400007387	Potato	plasma membrane	59.54	62.15
KRH33389	Soybean	plasma membrane	60.31	62.08
KRG90133	Soybean	plasma membrane	60.5	61.91
VIT_01s0026g01210.t01	Wine grape	plasma membrane	59.16	61.63
Solyc04g005840.1.1	Tomato	plasma membrane	58.59	61.52
PGSC0003DMT400003553	Potato	plasma membrane	55.73	60.83
Solyc02g087500.1.1	Tomato	plasma membrane	57.63	59.45
PGSC0003DMT400091384	Potato	plasma membrane	57.44	59.25
PGSC0003DMT400028782	Potato	plasma membrane	53.24	56.59
PGSC0003DMT400028781	Potato	plasma membrane	52.48	55.67
EES04353	Sorghum	plastid	53.05	53.67
Solyc10g084900.1.1	Tomato	plasma membrane	49.24	53.09
PGSC0003DMT400028779	Potato	plasma membrane	22.52	52.68
EES03906	Sorghum	golgi, peroxisome, plasma membrane	49.81	51.89
PGSC0003DMT400028775	Potato	plasma membrane	48.28	51.74
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	47.33	49.7
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	47.52	48.82
EES18341	Sorghum	plastid	46.18	46.36
EES01127	Sorghum	mitochondrion	42.94	39.34
EES18528	Sorghum	mitochondrion	36.45	38.43
KXG32181	Sorghum	endoplasmic reticulum, plasma membrane, plastid	39.69	37.48
KXG37209	Sorghum	mitochondrion	39.89	36.73
KXG23710	Sorghum	plastid	41.98	36.48
EES08969	Sorghum	mitochondrion	39.5	35.63
OQU86769	Sorghum	mitochondrion	34.35	33.52

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	UniProt:A0A1B6QQB3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	InterPro:HAD_sf	InterPro:IPR023214	EnsemblPlants:KXG40111	ProteinID:KXG40111	ProteinID:KXG40111.1
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
EnsemblPlantsGene:SORBI_3001G493300	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI00081AC2C2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:76240811..76244345

Molecular Weight (calculated)

56665.7 Da

IEP (calculated)

8.676

GRAVY (calculated)

0.144

Length

524 amino acids

Sequence
(BLAST)

001: MHAMPWWGGG EGEQPPFPSV DKCDASRLGR GSTVVADLDG ALLRSQDAFP YYALVAFETG GAARLAVLLL LAPLAAALRR AVSESAGARV LVFAATAGAR
101: VADVESAARA VLPRFYAADV HPDAWRVFSA CSGRRLVLTA APRVMAEPFL RGYLGADAVA GTELAEWRGR ATGWVDARRG GVLVGERKAQ ALREMLAAGE
201: MPDVGLGHRR SDYSFMSICK EAYLVPPTPV EAVRADMLPK RVVFHDGRLV QRPTPLVALL TVLWFPVGLL LSLVRVATGV LVPMRWLHVA FHALGVRVVV
301: RGTPPPPPRA DGDAARTSTG VLFACCHRTL LDAIFLSVAL GRPVAAVTYS LSRLSEFLSP IRTVRLTRDR AADAATIRRV LAEEGDLAIC PEGTTCREPF
401: LLRFSALFAE LTDDVVPVAV ECRMSMFHGT TATGWKGMDP FYFFMNPSPV YTVTFLDRLP PELTCGGGGK SSHWVANYVQ KLIASTLSYE CTGLTRKDKY
501: RELADNDGVV PVNTDDGGNK RMAW

Best Arabidopsis Sequence Match ( AT4G00400.1 )
(BLAST)

001: MSPEKKSQNF PPITECRDGE YDSIAADLDG TLLLSRSSFP YFMLVAVEAG SLLRGLILLL SLPFVIISYL FVSESLGIQI LIFISFAGLK IRDIELVSRA
101: VLPRFYAADV RKDSFEVFDK CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA ILKEFGNESP DLGLGDRTSD
201: HDFMSLCKKG YMVHATKSAT TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY EMLGIHLTIR GHRPPPPSPG
301: TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV
401: AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK

Arabidopsis Description

GPAT8Probable glycerol-3-phosphate acyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF03]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.