Factsheet for Solyc10g084900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028775	Potato	plasma membrane	88.68	88.14
Solyc04g005840.1.1	Tomato	plasma membrane	68.31	66.53
Solyc02g087500.1.1	Tomato	plasma membrane	65.84	62.99
EER90914	Sorghum	plasma membrane	62.55	60.2
Zm00001d033915_P001	Maize	plasma membrane	62.35	59.3
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	61.52	58.51
TraesCS4A01G248400.1	Wheat	plasma membrane	61.52	58.4
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	59.05	56.16
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	60.7	55.56
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	45.68	55.36
TraesCS4B01G066500.1	Wheat	plasma membrane	61.32	54.68
TraesCS4D01G280800.1	Wheat	peroxisome	55.97	54.4
TraesCS4B01G282100.1	Wheat	peroxisome	55.76	54.2
TraesCS4A01G021500.1	Wheat	peroxisome	55.56	54.0
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.56	52.84
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.35	52.64
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.14	52.45
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	56.17	52.4
EER91628	Sorghum	cytosol	55.56	52.12
HORVU4Hr1G074470.4	Barley	plastid	56.17	52.1
HORVU1Hr1G032150.4	Barley	peroxisome	55.97	50.37
Os03t0166600-00	Rice	cytosol	25.93	50.2
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	52.26	50.2
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	53.09	49.24
Solyc09g014350.2.1	Tomato	cytosol	51.03	49.21
HORVU4Hr1G011110.4	Barley	plastid	61.93	48.24
Solyc01g094700.2.1	Tomato	plasma membrane	48.97	47.51
TraesCS2A01G015700.1	Wheat	mitochondrion	55.35	46.3
Os10t0413400-00	Rice	plastid	56.17	44.25
Solyc04g011600.2.1	Tomato	plasma membrane	43.21	42.77
Solyc05g053030.1.1	Tomato	plasma membrane	43.42	42.03
Solyc07g056320.2.1	Tomato	plasma membrane	44.24	39.38
GSMUA_Achr5P14930_001	Banana	plasma membrane	51.23	34.02

Protein Annotations

Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020	GO:GO:0016021
GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791	GO:GO:0090447
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K4D3S4	PFAM:PF01553	PFAM:PF12710
PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593
EnsemblPlantsGene:Solyc10g084900.1	EnsemblPlants:Solyc10g084900.1.1	TMHMM:TMhelix	UniParc:UPI000276A59A	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:64266199..64267659

Molecular Weight (calculated)

54636.3 Da

IEP (calculated)

9.327

GRAVY (calculated)

0.266

Length

486 amino acids

Sequence
(BLAST)

001: MAITTFPMIE KCTSIDREND IVVTDLDGTL LRGRNSFAYF ALVAFDVDGV LRLLFLLLAS PIAGILYYFI SESAGIQVIV FATFVGMKVF NIESAARNVL
101: PKFYSEDLHP ESWRVFSSCG KRCVLTATPR IMVEPFLKDY LGTDIVLGTE IETYKGRATG FVRPPGVLVG KNKADTLTST FGDTQPEIGL GDRDTDIPFM
201: TLCKEGYFVP SNLKVNAVST KVLPKPVIFY DGRFIKKLTP LISLLVILWI PLGFLLACVR LSVMSFLPVP LQYYAFLATG IRLIINGIPP LHIKKSKGLL
301: FVCCHKTILD NIFLSVALDR SVPVVTYSTS RFLNIFSPIK TITLTRDRAF DASMIKKLLK QRDLTIFPEG TTSRGQFLLR FSSLFAEITN EIVPVAIEAK
401: MSMFHGTTTR GWKWMDPFFF LMNPRPTYEI TFLNKLSYEF TCKSGKSSHE VASYVQKVIG ETLSYECTTF TRKDKYMALD TIVKNP

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.