Factsheet for TraesCS4B01G066500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	91.38	97.46
TraesCS4A01G248400.1	Wheat	plasma membrane	90.83	96.68
EER90914	Sorghum	plasma membrane	83.67	90.3
Zm00001d033915_P001	Maize	plasma membrane	84.04	89.63
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	62.94	85.54
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	82.39	84.56
HORVU4Hr1G011110.4	Barley	plastid	93.03	81.25
PGSC0003DMT400007387	Potato	plasma membrane	69.72	75.7
Solyc04g005840.1.1	Tomato	plasma membrane	68.81	75.15
VIT_01s0026g01210.t01	Wine grape	plasma membrane	69.36	75.15
PGSC0003DMT400073428	Potato	cytosol	40.92	73.84
KRH33389	Soybean	plasma membrane	67.89	72.69
KRG90133	Soybean	plasma membrane	67.71	72.07
PGSC0003DMT400003553	Potato	plasma membrane	63.3	71.88
PGSC0003DMT400091384	Potato	plasma membrane	65.69	70.47
Solyc02g087500.1.1	Tomato	plasma membrane	65.32	70.08
PGSC0003DMT400028782	Potato	plasma membrane	60.92	67.34
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.12	67.32
TraesCS4B01G282100.1	Wheat	peroxisome	61.28	66.8
PGSC0003DMT400028781	Potato	plasma membrane	58.53	64.57
PGSC0003DMT400028779	Potato	plasma membrane	26.42	64.29
Solyc10g084900.1.1	Tomato	plasma membrane	54.68	61.32
PGSC0003DMT400028775	Potato	plasma membrane	54.86	61.15
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	52.29	57.11
TraesCS3B01G400000.1	Wheat	golgi	49.91	54.73
TraesCS6B01G051800.1	Wheat	mitochondrion	46.61	50.1
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	46.79	49.71
TraesCS6B01G052300.1	Wheat	mitochondrion	45.87	49.21
TraesCS1B01G292200.1	Wheat	plasma membrane	44.22	46.8
GSMUA_Achr5P14930_001	Banana	plasma membrane	57.43	42.76
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	40.55	41.62
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	40.37	41.04
TraesCS5B01G092200.1	Wheat	plasma membrane	37.43	39.01
TraesCS1B01G233800.1	Wheat	plastid	34.5	38.37
TraesCS2B01G158000.1	Wheat	mitochondrion	36.15	37.31
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	36.15	36.75
TraesCS5B01G511500.1	Wheat	mitochondrion	37.06	35.75
TraesCS3B01G173200.1	Wheat	mitochondrion	34.86	35.32

Protein Annotations

Gene3D:1.20.1440.100	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF43	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G066500	EnsemblPlants:TraesCS4B01G066500.1
TIGR:cd06551	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:59236228..59237972

Molecular Weight (calculated)

59326.8 Da

IEP (calculated)

9.316

GRAVY (calculated)

0.183

Length

545 amino acids

Sequence
(BLAST)

001: MQSSTQEAHI VALFVRAYSA LQLVCRERPG WLGPMAGTTT TTMTASPFPT VDKCASAGRS GDTVVADLDG TLLCGRSSFP YFAHMAFETG GVLRLLLLLV
101: LAPLAGLLYY VVSESAGIQV LIFASMAGAK VDDVEAVARA VLPKFYCSDL HPESWRVFSA CGRRCVLTAN PRIMVEAFLK DYIGAHVVLG TELVVWRGRA
201: TGLVRSPGVL VGDNKAAALR QAFGDAAPEV GLGDRKTDYP FMRLCKEGYV VPPTPKLKPV PREDLPKPVI FHDGRIVQKP SPALALLTLL WIPIGFVLSC
301: LRIAAGSLLP MRMVYHAFTA LGVRVTVKGN PPPPASLETG QTGVLFICSH RTLLDPIFLS TALGRPITAV TYSVSRLSEM LSPIRTVRLT RDRAADAAMI
401: RRLLKEGDLV ICPEGTTCRE PFLLRFSALF AELTDEIVPV AMENQMSMFH GTTARGWKGL DPFYFFMNPS PGYVVTFLNK LPHDLTCKGG KTSHEVANYI
501: QRLIASTLSY ECTSFTRKDK YKALAGNDGS VVSKPNIDKK KFMGS

Best Arabidopsis Sequence Match ( AT4G00400.1 )
(BLAST)

001: MSPEKKSQNF PPITECRDGE YDSIAADLDG TLLLSRSSFP YFMLVAVEAG SLLRGLILLL SLPFVIISYL FVSESLGIQI LIFISFAGLK IRDIELVSRA
101: VLPRFYAADV RKDSFEVFDK CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA ILKEFGNESP DLGLGDRTSD
201: HDFMSLCKKG YMVHATKSAT TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY EMLGIHLTIR GHRPPPPSPG
301: TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV
401: AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK

Arabidopsis Description

GPAT8Probable glycerol-3-phosphate acyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF03]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.