Factsheet for TraesCS1B01G287900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	87.72	81.67
HORVU1Hr1G073340.2	Barley	plasma membrane	79.53	81.6
TraesCS1A01G278700.1	Wheat	plastid	85.58	80.26
Zm00001d010078_P001	Maize	plasma membrane	65.89	69.55
Os05t0448300-01	Rice	plasma membrane	65.5	69.14
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	68.42	68.82
TraesCS3B01G400000.1	Wheat	golgi	64.52	66.6
KRH75836	Soybean	cytosol, plasma membrane, plastid	58.87	61.38
CDY69719	Canola	cytosol, golgi, peroxisome	50.29	60.42
KRH49307	Soybean	plasma membrane	58.28	60.28
VIT_08s0007g02000.t01	Wine grape	golgi	58.48	60.12
KRH66036	Soybean	plasma membrane	58.09	59.84
CDX93327	Canola	golgi, peroxisome, plasma membrane	57.89	59.28
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	57.89	59.28
CDY64226	Canola	peroxisome	57.7	59.08
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	57.7	59.08
Bra005137.1-P	Field mustard	peroxisome	57.5	58.88
CDX74912	Canola	peroxisome	57.31	58.68
GSMUA_Achr10P...	Banana	plasma membrane	49.51	58.66
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	50.49	58.07
PGSC0003DMT400052335	Potato	cytosol	56.34	57.11
Solyc09g014350.2.1	Tomato	cytosol	55.95	56.94
KRH55439	Soybean	plasma membrane	30.6	56.47
KRG88817	Soybean	plasma membrane	30.6	55.67
KRH00171	Soybean	plastid	58.48	55.66
TraesCS4B01G282100.1	Wheat	peroxisome	49.9	51.2
TraesCS6B01G051800.1	Wheat	mitochondrion	50.49	51.08
TraesCS6B01G052300.1	Wheat	mitochondrion	50.29	50.79
GSMUA_Achr10P...	Banana	plasma membrane	48.93	50.2
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.12	49.32
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	37.23	47.63
TraesCS4B01G066500.1	Wheat	plasma membrane	49.71	46.79
TraesCS1B01G292200.1	Wheat	plasma membrane	41.91	41.75
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	36.06	34.51
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	35.67	34.46
TraesCS5B01G092200.1	Wheat	plasma membrane	35.09	34.42
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	34.11	32.65
TraesCS1B01G233800.1	Wheat	plastid	30.41	31.84
TraesCS2B01G158000.1	Wheat	mitochondrion	32.75	31.82
TraesCS3B01G173200.1	Wheat	mitochondrion	33.33	31.78
TraesCS5B01G511500.1	Wheat	mitochondrion	32.94	29.91

Protein Annotations

EnsemblPlants:TraesCS1B01G287900.1	EnsemblPlantsGene:TraesCS1B01G287900	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	PFAM:PF01553	PFAM:PF12710	SEG:seg
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:5.2.1.2.2	:

Description

No Description!

Coordinates

chr1B:-:500599442..500624765

Molecular Weight (calculated)

56246.6 Da

IEP (calculated)

9.701

GRAVY (calculated)

0.056

Length

513 amino acids

Sequence
(BLAST)

001: MYEKRHGGPR FKPIEECATE GRSRQTVTAD LDGTLLLSRS AFPYYLLIAL EAGGTGGKRA FGRGSQLPLV ACGLLRALAL LASVPLVYLT YISVSEPLAV
101: RTFVYITVAG LRVSDIEAVA RSVLPRFYAG DVHPEGWRVF RSFGRRCIVT ASPRVMVEPF ARAFLGADRV IGTELEVDGS GRATGFVAQP GVLGVRRRVP
201: DVGMGDRESD FDFMSVCKEG YIVTRSKYSP VPKNQLESPV ILHDGRLVRR PTDINALLTF LWLPIGFALA LLRVHVKPLL PNRVAFYAWK LMGVKLAVRG
301: NPPPPATKGR SGVLFVCNHR TALDPTMVSV ALGREVTRVT HNSASSIVTD HTSPVKAVAL SGERDGDAAR IRRLLEEGDL VVFPEGTACR EPYLLRFGAL
401: FAELTDRIVP VAIVTKESMF HGSTVRGLKA TDPYFFFMNP RPTYEITFLD QLPRELTCGG GKSPVEVAVR EYVSKLLARV LGFECTSITR EEKYGIVGAA
501: CRPTTMDLEK PTT

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.