Factsheet for TraesCS1D01G278000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	81.67	87.72
TraesCS1A01G278700.1	Wheat	plastid	86.93	87.57
HORVU1Hr1G073340.2	Barley	plasma membrane	77.86	85.8
Os05t0448300-01	Rice	plasma membrane	64.43	73.05
Zm00001d010078_P001	Maize	plasma membrane	63.52	72.02
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	66.61	71.96
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	62.61	69.42
CDY69719	Canola	cytosol, golgi, peroxisome	49.18	63.47
KRH49307	Soybean	plasma membrane	56.62	62.9
KRH75836	Soybean	cytosol, plasma membrane, plastid	56.08	62.8
VIT_08s0007g02000.t01	Wine grape	golgi	56.44	62.32
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	56.62	62.28
CDY64226	Canola	peroxisome	56.44	62.08
CDX93327	Canola	golgi, peroxisome, plasma membrane	56.44	62.08
Bra005137.1-P	Field mustard	peroxisome	56.26	61.88
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	56.08	61.68
CDX74912	Canola	peroxisome	56.08	61.68
KRH66036	Soybean	plasma membrane	55.17	61.04
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	49.36	60.99
GSMUA_Achr10P...	Banana	plasma membrane	47.91	60.97
KRH00171	Soybean	plastid	57.89	59.18
PGSC0003DMT400052335	Potato	cytosol	54.27	59.09
Solyc09g014350.2.1	Tomato	cytosol	53.72	58.73
KRH55439	Soybean	plasma membrane	28.68	56.83
KRG88817	Soybean	plasma membrane	28.68	56.03
GSMUA_Achr10P...	Banana	plasma membrane	47.73	52.6
TraesCS4D01G280800.1	Wheat	peroxisome	47.55	52.4
TraesCS6D01G043000.1	Wheat	mitochondrion	47.91	52.28
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	48.09	51.86
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.82	50.49
TraesCS1D01G282300.1	Wheat	plasma membrane	39.56	42.25
TraesCS5D01G099700.1	Wheat	plasma membrane	34.12	35.07
TraesCS7D01G498800.1	Wheat	mitochondrion	32.67	35.02
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	32.85	33.77
TraesCS4D01G143600.1	Wheat	mitochondrion	32.85	32.5
TraesCS3D01G333200.1	Wheat	mitochondrion	31.94	32.47
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	28.13	31.89
TraesCS2D01G136700.1	Wheat	mitochondrion	30.31	31.63
TraesCS3D01G155000.1	Wheat	mitochondrion	29.76	30.54
TraesCS5D01G512000.1	Wheat	mitochondrion	30.49	29.84
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	26.68	29.05
TraesCS3D01G225400.1	Wheat	mitochondrion	13.07	28.02

Protein Annotations

Gene3D:1.20.1440.100	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	EnsemblPlantsGene:TraesCS1D01G278000	EnsemblPlants:TraesCS1D01G278000.1	SEG:seg

Description

No Description!

Coordinates

chr1D:+:375355655..375365409

Molecular Weight (calculated)

60709.2 Da

IEP (calculated)

9.017

GRAVY (calculated)

0.095

Length

551 amino acids

Sequence
(BLAST)

001: MSAEIIEEPR AQGISIIYSL RLLPLFFVNL PLSTHISSKQ LRRPSISSCM RNGMAAPRFR PIEECATEGR SRQTVAADLD GTLLLSRSAF PYYLLIALEA
101: GGLLRALALL ASVPFVYLTY ISVSEPLAVR TFVYIAVAGL RVSDIEAVAR SVLPRFYAGD VHPEGWRVFR SFGRRCIVTA SPRVMVEPFA RAFLGADRVI
201: GTELEVDGSG RATGFVAQPG VLVSEHKRQA VMREFGDALP DVGMGDRESD FDFMSICKEG YIVTRSKYSP VPKNQLEGPV ILHDGRLVQP PTDINALLTF
301: LWLPIGFALA LLRVHVKPLL PDRVAFYAYK LMGVKLAVRG NPPPPPTKGR PGVLFVCNHR TALDPTMVSV ALGRKVTRVT HNSASGILTE HTSPVKAVAL
401: SGERDGDAAR IRRLLEEGDL VLFPEGTACR QPLLLRFGAL FAELTDRIVP VAIATEESMF HGSTVRGLKT MDPYFFFMNP RPTYEITFLD QLPRELTCGN
501: GKSPVEVANY IQKLLARVLG FECTSITREE MYRIVGAACR PTTTDLEKPT T

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.