Factsheet for VIT_08s0007g02000.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
golgi 3
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49307	Soybean	plasma membrane	83.17	83.67
KRH55439	Soybean	plasma membrane	45.89	82.37
KRH75836	Soybean	cytosol, plasma membrane, plastid	79.96	81.1
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	80.56	80.24
PGSC0003DMT400052335	Potato	cytosol	81.36	80.24
KRG88817	Soybean	plasma membrane	45.29	80.14
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	80.36	80.04
KRH66036	Soybean	plasma membrane	79.56	79.72
Solyc09g014350.2.1	Tomato	cytosol	80.36	79.56
CDY64226	Canola	peroxisome	79.76	79.44
CDX93327	Canola	golgi, peroxisome, plasma membrane	79.56	79.24
CDX74912	Canola	peroxisome	79.36	79.04
Bra005137.1-P	Field mustard	peroxisome	79.36	79.04
CDY69719	Canola	cytosol, golgi, peroxisome	67.54	78.92
KRH00171	Soybean	plastid	82.97	76.81
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	74.55	74.85
EES03906	Sorghum	golgi, peroxisome, plasma membrane	74.35	73.76
Zm00001d042813_P001	Maize	plastid	69.54	73.67
HORVU3Hr1G084990.1	Barley	plasma membrane	71.34	71.63
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	63.93	71.52
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	71.14	71.43
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	70.74	71.03
TraesCS3B01G400000.1	Wheat	golgi	70.74	71.03
GSMUA_Achr10P...	Banana	plasma membrane	61.32	70.67
GSMUA_Achr10P...	Banana	plasma membrane	64.73	64.6
HORVU1Hr1G073340.2	Barley	plasma membrane	62.93	62.8
Zm00001d010078_P001	Maize	plasma membrane	59.72	61.32
Os05t0448300-01	Rice	plasma membrane	59.32	60.91
VIT_15s0046g02400.t01	Wine grape	plasma membrane	61.12	60.88
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	60.52	59.22
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	60.12	58.48
VIT_01s0026g01210.t01	Wine grape	plasma membrane	58.12	57.65
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	62.32	56.44
TraesCS1A01G278700.1	Wheat	plastid	61.72	56.31
VIT_13s0019g01990.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	50.1	51.33
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	45.09	45.09
VIT_12s0142g00040.t01	Wine grape	plasma membrane	46.89	43.82
VIT_07s0005g01760.t01	Wine grape	plasma membrane	39.68	37.86

Protein Annotations

EntrezGene:100264832	wikigene:100264832	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ProteinID:CCB55505
ProteinID:CCB55505.1	ncoils:Coil	UniProt:F6HKT5	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143
GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787
GO:GO:0016791	GO:GO:0090447	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EntrezGene:LOC100264832
wikigene:LOC100264832	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TIGR:TC70592	TMHMM:TMhelix	UniParc:UPI00015C99CD
ArrayExpress:VIT_08s0007g02000	EnsemblPlantsGene:VIT_08s0007g02000	EnsemblPlants:VIT_08s0007g02000.t01	unigene:Vvi.19473	RefSeq:XP_002279091	RefSeq:XP_002279091.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:16048086..16050441

Molecular Weight (calculated)

55475.2 Da

IEP (calculated)

9.557

GRAVY (calculated)

0.090

Length

499 amino acids

Sequence
(BLAST)

001: MGAQRHFQPI SKCSSDGRAN QTVAADLDGT LLVSRSAFPY FMLVALEAGS LVRAILLLAS VPLVYFIYLF ISESLAIKIF IYMAFAGLKV REIELVSRSV
101: LPKFYAEDVH PESWRVFNSF GKRYIITANP RIMVEPFVKT YMGADKVLGT ELEVSNSGRA TGFVKKPGVL VGEHKKAAVQ QEFGMNLPDV GLGDRDTDHD
201: FMSLCKEGYM VPRTKCEPLP RNKLLSPVIF HEGRLVQRPT PVAALLTFLW MPIGIILSIL RVYLNIPLPE RIVRYNYKIL GIKLIVKGTP PPPPKGGQSG
301: VLFVCNHRTV LDPVVTAVAL GRKISCVTYS ISKFSELISP IKAVALSRER EKDAANIKRL LEEGDLVICP EGTTCREPFL LRFSALFAEL TDRIVPVAIN
401: TKQSVFYGTS TRGYKLLDPY FVFMNPMPTY EITFLNQLPA ELTCKGGKSP IEVANYIQRV LAGTLGFECT NLTRKDKYAT LAGTDGSVPF KNEKEKEKA

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.