Factsheet for TraesCS3A01G368400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	98.79	98.79
TraesCS3B01G400000.1	Wheat	golgi	98.79	98.79
HORVU3Hr1G084990.1	Barley	plasma membrane	98.39	98.39
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	90.54	90.54
EES03906	Sorghum	golgi, peroxisome, plasma membrane	90.74	89.66
Zm00001d042813_P001	Maize	plastid	83.1	87.69
KRH49307	Soybean	plasma membrane	71.23	71.37
VIT_08s0007g02000.t01	Wine grape	golgi	71.43	71.14
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	63.18	70.4
KRH75836	Soybean	cytosol, plasma membrane, plastid	68.81	69.51
GSMUA_Achr10P...	Banana	plasma membrane	59.76	68.59
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	68.61	68.06
KRH66036	Soybean	plasma membrane	68.01	67.87
KRH55439	Soybean	plasma membrane	37.83	67.63
PGSC0003DMT400052335	Potato	cytosol	68.41	67.19
Bra005137.1-P	Field mustard	peroxisome	67.4	66.87
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	67.4	66.87
CDY64226	Canola	peroxisome	67.4	66.87
Solyc09g014350.2.1	Tomato	cytosol	67.61	66.67
CDX74912	Canola	peroxisome	67.2	66.67
CDY69719	Canola	cytosol, golgi, peroxisome	57.14	66.51
CDX93327	Canola	golgi, peroxisome, plasma membrane	66.8	66.27
KRH00171	Soybean	plastid	71.43	65.86
GSMUA_Achr10P...	Banana	plasma membrane	64.39	64.0
KRG88817	Soybean	plasma membrane	36.22	63.83
TraesCS1A01G278700.1	Wheat	plastid	69.22	62.89
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	55.33	54.24
TraesCS4A01G021500.1	Wheat	peroxisome	53.92	53.6
TraesCS4A01G248400.1	Wheat	plasma membrane	54.53	52.93
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.92	52.45
TraesCS1A01G283100.1	Wheat	plasma membrane	46.28	44.83
TraesCS2A01G015700.1	Wheat	mitochondrion	51.91	44.41
TraesCS4A01G171600.1	Wheat	mitochondrion	35.01	38.75
TraesCS3A01G339700.1	Wheat	mitochondrion	40.64	37.34
TraesCS3A01G227400.1	Wheat	mitochondrion	40.04	37.13
TraesCS5A01G086200.1	Wheat	plasma membrane	39.84	36.67
TraesCS2A01G134500.1	Wheat	mitochondrion	38.43	36.24
TraesCS1A01G220600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	35.61	35.4
TraesCS3A01G146100.1	Wheat	mitochondrion	38.03	35.2
TraesCS3A01G147200.1	Wheat	plastid	35.41	34.92
TraesCS2A01G329800.1	Wheat	mitochondrion	35.21	34.59
TraesCS4A01G361400.1	Wheat	mitochondrion	38.03	33.93
TraesCS7A01G509500.1	Wheat	mitochondrion	14.29	26.39
TraesCS3A01G227500.1	Wheat	mitochondrion	12.47	25.0

Protein Annotations

MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G368400	EnsemblPlants:TraesCS3A01G368400.1
TIGR:cd06551	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:617298845..617303576

Molecular Weight (calculated)

55359.0 Da

IEP (calculated)

9.564

GRAVY (calculated)

0.075

Length

497 amino acids

Sequence
(BLAST)

001: MASPRFKPVE ECSSEGRSGQ TVAADFDGTL LRSSNAFPYY LLVALEAGSV LRAVALLLSV PFVYVTYIFF SESLAISTLV YISVAGLKVR SIEMAARSVL
101: PKFYAQDVHP ESWRVFRSFG KRYIITASPR VMVEPFAREF LGADRVVGTE LEVGKSGKAT GFMVKPGVLV GEHKKQAVVK ELGDAVPDVG MGDRATDFNF
201: MSICKEAYLV TSRKYSPVPK NQLLTPLILH DGRLVQRPTP LVALVTFLWM PFGFALALLR VYINLPLPER IVFYIYHMMG IRLIVKGTPP PPPKKGSPGV
301: LFVCNHRTVL DPIEVAVALG RKVSCVTYSI SKFSELISPI KAVALTRERD KDAENIRRLL EEGDLVICPE GTTCREPYLL RFSALFAELT DRIVPVAINT
401: REHMFHGSTV RGFKLMDPYF FFMNPRPVYE VTFLNMLPKE LTCGGGKSPI EVANYIQKTL SDQLGFECTT ITRKEKYGIL AGTDGRVPSK NKDKEKN

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.