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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:
  • cytosol 2
  • golgi 2
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:golgi
Plant-mPloc:endoplasmic reticulum, mitochondrion
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69719 Canola cytosol, golgi, peroxisome 85.23 100.0
Bra005137.1-P Field mustard peroxisome 94.21 94.21
AT2G38110.1 Thale cress cytosol, golgi, plasma membrane 91.82 91.82
VIT_08s0007g02000.t01 Wine grape golgi 80.04 80.36
KRH75836 Soybean cytosol, plasma membrane, plastid 78.64 80.08
KRH49307 Soybean plasma membrane 77.45 78.23
KRH66036 Soybean plasma membrane 77.25 77.71
KRH55439 Soybean plasma membrane 41.72 75.18
PGSC0003DMT400052335 Potato cytosol 74.85 74.11
Solyc09g014350.2.1 Tomato cytosol 73.65 73.21
KRG88817 Soybean plasma membrane 41.12 73.05
KRH00171 Soybean plastid 77.64 72.17
Os01t0855000-01 Rice cytosol, peroxisome, plasma membrane 70.46 71.03
Zm00001d042813_P001 Maize plastid 66.67 70.91
EES03906 Sorghum golgi, peroxisome, plasma membrane 70.86 70.58
GSMUA_Achr3P17610_001 Banana cytosol, golgi, plasma membrane 61.08 68.61
GSMUA_Achr10P... Banana plasma membrane 58.68 67.9
HORVU3Hr1G084990.1 Barley plasma membrane 67.27 67.81
TraesCS3D01G361300.1 Wheat golgi, plastid, unclear 66.87 67.4
TraesCS3B01G400000.1 Wheat golgi 66.87 67.4
TraesCS3A01G368400.1 Wheat cytosol, peroxisome, plasma membrane 66.87 67.4
Bra033249.1-P Field mustard plasma membrane 60.48 64.33
Bra032643.1-P Field mustard plasma membrane 62.67 62.67
HORVU1Hr1G073340.2 Barley plasma membrane 62.08 62.2
Bra037338.1-P Field mustard plasma membrane 60.88 61.0
GSMUA_Achr10P... Banana plasma membrane 60.88 61.0
Zm00001d010078_P001 Maize plasma membrane 58.28 60.08
Os05t0448300-01 Rice plasma membrane 57.88 59.67
KXG22121 Sorghum endoplasmic reticulum, golgi, plasma membrane 59.88 58.82
TraesCS1B01G287900.1 Wheat golgi, peroxisome, plasma membrane 59.28 57.89
TraesCS1A01G278700.1 Wheat plastid 61.88 56.67
TraesCS1D01G278000.1 Wheat plasma membrane, plastid 62.28 56.62
Bra034843.1-P Field mustard cytosol, plasma membrane, plastid 46.11 46.2
Bra009162.1-P Field mustard plasma membrane 45.31 45.58
Bra002041.1-P Field mustard cytosol 44.31 44.14
Bra034796.1-P Field mustard plasma membrane 39.52 41.77
Bra033323.1-P Field mustard endoplasmic reticulum, golgi 35.53 39.12
Bra015507.1-P Field mustard endoplasmic reticulum, plasma membrane 43.71 38.35
Bra036303.1-P Field mustard plasma membrane 33.73 37.06
Bra002040.1-P Field mustard plasma membrane 28.14 36.91
Bra000903.1-P Field mustard mitochondrion, plasma membrane 35.73 34.42
Protein Annotations
MapMan:21.9.1.5.1Gene3D:3.40.50.1000MapMan:5.2.1.2.2EnsemblPlantsGene:Bra017137EnsemblPlants:Bra017137.1EnsemblPlants:Bra017137.1-P
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214UniProt:M4DKV6PFAM:PF01553PFAM:PF12710PANTHER:PTHR15486PANTHER:PTHR15486:SF27
InterPro:Plipid/glycerol_acylTrfaseSMART:SM00563SUPFAM:SSF56784SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0002544803
SEG:seg:::::
Description
AT2G38110 (E=9e-251) ATGPAT6, GPAT6 | GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase
Coordinates
chrA04:-:16391726..16394139
Molecular Weight (calculated)
55792.7 Da
IEP (calculated)
9.888
GRAVY (calculated)
0.095
Length
501 amino acids
Sequence
(BLAST)
001: MGAQEKRRRF QPITSYEIKD RSNQTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LTSVPFVYLT YLSVSETLAI NIFIFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDAWSIF NTFGKRCIVT ASPRIMVEPF VKTYLGVDKV LGTELEVSKS GRATGFVRRP GVLVGQHKCD AILREFGGVA SGLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LNPIIFHEGR LVQRPTPLVA LLTLLWLPVG FLVSLIRVYT NIPLPERIAR YNYKLTGIKL IVNGNPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS VFNGTTTRGY KFLDPYFAFM NPVPTFEITF LKQLPAELTC KGGKSPIEVA NYIQRVLAGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: I
Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.