Factsheet for AT2G38110.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

cytosol 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64226	Canola	peroxisome	92.42	92.42
CDX74912	Canola	peroxisome	92.22	92.22
Bra005137.1-P	Field mustard	peroxisome	92.02	92.02
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	91.82	91.82
CDY69719	Canola	cytosol, golgi, peroxisome	78.04	91.57
CDX93327	Canola	golgi, peroxisome, plasma membrane	91.42	91.42
VIT_08s0007g02000.t01	Wine grape	golgi	80.24	80.56
KRH75836	Soybean	cytosol, plasma membrane, plastid	78.44	79.88
KRH49307	Soybean	plasma membrane	77.84	78.63
KRH66036	Soybean	plasma membrane	76.85	77.31
KRH55439	Soybean	plasma membrane	42.12	75.9
PGSC0003DMT400052335	Potato	cytosol	76.25	75.49
Solyc09g014350.2.1	Tomato	cytosol	75.05	74.6
KRG88817	Soybean	plasma membrane	41.72	74.11
KRH00171	Soybean	plastid	78.04	72.54
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	71.86	72.43
EES03906	Sorghum	golgi, peroxisome, plasma membrane	72.06	71.77
Zm00001d042813_P001	Maize	plastid	67.47	71.76
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	62.28	69.96
HORVU3Hr1G084990.1	Barley	plasma membrane	68.06	68.61
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	68.06	68.61
GSMUA_Achr10P...	Banana	plasma membrane	59.28	68.59
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	67.86	68.41
TraesCS3B01G400000.1	Wheat	golgi	67.86	68.41
HORVU1Hr1G073340.2	Barley	plasma membrane	62.48	62.6
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	61.88	62.0
AT1G01610.1	Thale cress	plasma membrane	62.08	61.83
GSMUA_Achr10P...	Banana	plasma membrane	61.68	61.8
Os05t0448300-01	Rice	plasma membrane	58.48	60.29
Zm00001d010078_P001	Maize	plasma membrane	58.08	59.88
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	59.68	58.63
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	59.08	57.7
TraesCS1A01G278700.1	Wheat	plastid	61.28	56.12
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	61.68	56.08
AT3G11430.1	Thale cress	plasma membrane	47.51	47.41
AT5G06090.1	Thale cress	plasma membrane	45.51	45.6
AT3G11325.2	Thale cress	endoplasmic reticulum, plasma membrane	33.93	43.26
AT1G06520.1	Thale cress	plasma membrane	43.51	37.27
AT1G02390.1	Thale cress	plasma membrane	37.72	35.66
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	37.33	34.12

Protein Annotations

MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EntrezGene:818389	ProteinID:AAC27160.1	ProteinID:AEC09490.1
ArrayExpress:AT2G38110	EnsemblPlantsGene:AT2G38110	RefSeq:AT2G38110	TAIR:AT2G38110	RefSeq:AT2G38110-TAIR-G	EnsemblPlants:AT2G38110.1
TAIR:AT2G38110.1	Symbol:ATGPAT6	EMBL:AY062721	EMBL:AY114657	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010143	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746
GO:GO:0016787	GO:GO:0016791	GO:GO:0090447	GO:GO:0102419	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	RefSeq:NP_181346.1	UniProt:O80437	PFAM:PF01553	PFAM:PF12710	PO:PO:0000013
PO:PO:0000037	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007098	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR15486
PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix
UniParc:UPI000009C8F4	SEG:seg	:	:	:	:

Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]

Coordinates

chr2:-:15952496..15955752

Molecular Weight (calculated)

56142.1 Da

IEP (calculated)

10.015

GRAVY (calculated)

0.033

Length

501 amino acids

Sequence
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.