Factsheet for VIT_15s0046g02400.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 2
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48117	Soybean	plasma membrane	83.83	84.17
KRH64978	Soybean	plasma membrane	81.64	81.8
Bra033249.1-P	Field mustard	plasma membrane	76.25	81.1
CDY71876	Canola	cytosol, extracellular, mitochondrion	26.15	79.88
Bra032643.1-P	Field mustard	plasma membrane	79.84	79.84
CDY38016	Canola	plasma membrane	80.24	79.6
CDX90045	Canola	plasma membrane	79.84	79.52
CDY15166	Canola	plasma membrane	79.84	79.52
Solyc01g094700.2.1	Tomato	plasma membrane	79.24	79.24
PGSC0003DMT400000152	Potato	plasma membrane	79.04	79.04
AT1G01610.1	Thale cress	plasma membrane	78.44	78.13
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	77.64	77.8
Bra037338.1-P	Field mustard	plasma membrane	76.25	76.4
GSMUA_Achr1P06780_001	Banana	plasma membrane	50.9	62.2
VIT_08s0007g02000.t01	Wine grape	golgi	60.88	61.12
TraesCS6D01G043000.1	Wheat	mitochondrion	56.09	55.64
TraesCS6B01G051800.1	Wheat	mitochondrion	55.89	55.23
EES04353	Sorghum	plastid	56.49	54.63
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	55.09	54.44
TraesCS6B01G052300.1	Wheat	mitochondrion	55.09	54.33
Zm00001d014984_P001	Maize	endoplasmic reticulum	55.09	53.59
VIT_01s0026g01210.t01	Wine grape	plasma membrane	52.89	52.68
Os02t0114400-00	Rice	mitochondrion	22.95	50.44
VIT_13s0019g01990.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	45.11	46.41
HORVU6Hr1G006810.7	Barley	mitochondrion	54.69	43.7
VIT_07s0005g01760.t01	Wine grape	plasma membrane	43.51	41.68
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	40.92	41.08
VIT_12s0142g00040.t01	Wine grape	plasma membrane	43.31	40.64

Protein Annotations

EntrezGene:100243093	wikigene:100243093	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ProteinID:CCB62435
ProteinID:CCB62435.1	UniProt:F6I639	EMBL:FN596755	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791
GO:GO:0090447	InterPro:HAD_sf	InterPro:IPR023214	EntrezGene:LOC100243093	wikigene:LOC100243093	PFAM:PF01553
PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593
TIGR:TC53445	TIGR:TC57609	TMHMM:TMhelix	UniParc:UPI0001984CDA	ArrayExpress:VIT_15s0046g02400	EnsemblPlantsGene:VIT_15s0046g02400
EnsemblPlants:VIT_15s0046g02400.t01	unigene:Vvi.5199	RefSeq:XP_002275348	RefSeq:XP_002275348.1	SEG:seg	:

Description

No Description!

Coordinates

chr15:-:19184607..19187326

Molecular Weight (calculated)

55728.5 Da

IEP (calculated)

9.743

GRAVY (calculated)

0.091

Length

501 amino acids

Sequence
(BLAST)

001: MSPPPKRARK FPSITTYAGG DHRSIAADLD GTLLVSRSSF PYFMLVAVEA GSLLRGLFLL LSLPIVIVAY LFISEEIGIQ ILIFISFSGL KIRDIELASQ
101: AVLPRFYAND VRRESWEVFE KCERKVVVTA NPTLMVEPFV RDFLGGTKVL GTEIEVNPKT KKATGFVKKP GVLVGDRKRL ALLKEFGDEL PDIGIGDRES
201: DHDFMSICKE GYMVLPSKSA TPVPPNRLKT PIIFHDGRFV QPPTPLTALI IYLWLPFGFA LSIFRVYFNL PLPERIVRYT YPMLGINLVI RGNPPPPPSP
301: GSPGNLYVCN HRTALDPIVI AIALRRKVSC VTYSVSRLSR FLSPIPAVAL TRDRAADAAR ISSILQKGDL VVCPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAVNVKQNMF HGTTVRGVKF WDAYFYFMNP RPTYEITFLD RLPEEMTCKA GGKSAIEVAN HVQKVLGGVL GFECTGLTRK DKYMLLGGND GKVESMYNAK
501: K

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.