Factsheet for GSMUA_Achr1P06780_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	56.1	53.12
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	57.56	52.91
Solyc01g094700.2.1	Tomato	plasma membrane	63.41	51.9
PGSC0003DMT400000152	Potato	plasma membrane	63.17	51.7
KRH64978	Soybean	plasma membrane	62.44	51.2
EES04353	Sorghum	plastid	64.63	51.16
KRH48117	Soybean	plasma membrane	62.2	51.1
VIT_15s0046g02400.t01	Wine grape	plasma membrane	62.2	50.9
Bra033249.1-P	Field mustard	plasma membrane	58.29	50.74
CDX90045	Canola	plasma membrane	61.95	50.5
Bra032643.1-P	Field mustard	plasma membrane	61.46	50.3
CDY38016	Canola	plasma membrane	61.95	50.3
CDY15166	Canola	plasma membrane	61.46	50.1
Bra037338.1-P	Field mustard	plasma membrane	60.98	50.0
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	60.98	50.0
AT1G01610.1	Thale cress	plasma membrane	60.73	49.5
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	60.98	49.31
Zm00001d014984_P001	Maize	endoplasmic reticulum	61.71	49.13
TraesCS6D01G043000.1	Wheat	mitochondrion	60.49	49.11
TraesCS6B01G051800.1	Wheat	mitochondrion	60.0	48.52
GSMUA_Achr10P...	Banana	plasma membrane	59.02	48.4
TraesCS6B01G052300.1	Wheat	mitochondrion	59.27	47.83
CDY71876	Canola	cytosol, extracellular, mitochondrion	18.05	45.12
Os02t0114400-00	Rice	mitochondrion	24.63	44.3
GSMUA_Achr3P23260_001	Banana	golgi, plastid, vacuole	30.49	40.72
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	42.44	40.28
HORVU6Hr1G006810.7	Barley	mitochondrion	59.76	39.08
GSMUA_Achr2P16430_001	Banana	plasma membrane	40.98	37.67
GSMUA_Achr10P...	Banana	plasma membrane	27.32	34.67
GSMUA_Achr8P27070_001	Banana	plastid	40.49	30.13
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	33.17	29.76
GSMUA_Achr11P...	Banana	mitochondrion	36.34	29.33
GSMUA_Achr5P14930_001	Banana	plasma membrane	51.95	29.1
GSMUA_Achr3P24330_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane	34.63	27.31
GSMUA_Achr8P06330_001	Banana	mitochondrion	34.88	27.13
GSMUA_Achr3P16480_001	Banana	mitochondrion	33.17	26.72
GSMUA_Achr7P05580_001	Banana	cytosol	31.22	25.0
GSMUA_Achr5P27160_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	35.37	15.03

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06780_001	EnsemblPlants:GSMUA_Achr1T06780_001	EnsemblPlantsGene:GSMUA_Achr1G06780_001	Gene3D:3.40.50.1000	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:HAD_sf	InterPro:IPR023214	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	SEG:seg
SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000295C842	UniProt:M0RXN6	MapMan:35.1	:

Description

Probable glycerol-3-phosphate acyltransferase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06780_001]

Coordinates

chr1:-:5381530..5383409

Molecular Weight (calculated)

44742.5 Da

IEP (calculated)

8.646

GRAVY (calculated)

0.094

Length

410 amino acids

Sequence
(BLAST)

001: MPAEGRKSFP YVSRCDLSGR EGHVAAADLD GTLLVSRSSF PYFFLLAVEA GSLLRGAALL LLSPLILLVY KLFSEAAGIQ ILIYVAVAGL RARDVELAAR
101: AAFARECLGA DKVLGTELEV DERTGRATGR VAEGGVLVGP RKKEAVEREF GAAPPDLGLG DRESDHDFMA LCKEAYMVPP DPKAARVPPE QLDSLIVFHD
201: GRLVQRPDPR VALLVLLWLP LGFALALFRV FFNLLVPGPF VRHTYRRTGI RLSIRGSPPP PPSPGSPGSL FVCNHRTALD PILVSVALGR LVSCVTYSGD
301: LLSDRIVPVA INTRLSMFHA TTVRGFKFMD PYFFFMNPRP TYEVTFLEPL REEQTCKGGR SPVEVANHVQ KVIAGALGFE CTALTRKDKY MKLGGNDGDI
401: RSLSSSFKND

Best Arabidopsis Sequence Match ( AT4G00400.1 )
(BLAST)

001: MSPEKKSQNF PPITECRDGE YDSIAADLDG TLLLSRSSFP YFMLVAVEAG SLLRGLILLL SLPFVIISYL FVSESLGIQI LIFISFAGLK IRDIELVSRA
101: VLPRFYAADV RKDSFEVFDK CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA ILKEFGNESP DLGLGDRTSD
201: HDFMSLCKKG YMVHATKSAT TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY EMLGIHLTIR GHRPPPPSPG
301: TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV
401: AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK

Arabidopsis Description

GPAT8Probable glycerol-3-phosphate acyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF03]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.