CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 3
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014984_P001	Maize	endoplasmic reticulum	88.42	88.93
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	79.15	80.87
TraesCS6B01G051800.1	Wheat	mitochondrion	78.96	80.67
TraesCS6D01G043000.1	Wheat	mitochondrion	78.57	80.59
TraesCS6B01G052300.1	Wheat	mitochondrion	78.57	80.12
Os02t0114400-00	Rice	mitochondrion	34.17	77.63
GSMUA_Achr1P06780_001	Banana	plasma membrane	51.16	64.63
HORVU6Hr1G006810.7	Barley	mitochondrion	77.8	64.27
CDY71876	Canola	cytosol, extracellular, mitochondrion	20.27	64.02
KRH48117	Soybean	plasma membrane	55.98	58.12
KRH64978	Soybean	plasma membrane	55.79	57.8
Bra033249.1-P	Field mustard	plasma membrane	52.12	57.32
PGSC0003DMT400000152	Potato	plasma membrane	54.83	56.69
Bra032643.1-P	Field mustard	plasma membrane	54.83	56.69
VIT_15s0046g02400.t01	Wine grape	plasma membrane	54.63	56.49
Solyc01g094700.2.1	Tomato	plasma membrane	54.63	56.49
CDX90045	Canola	plasma membrane	54.83	56.46
CDY38016	Canola	plasma membrane	55.02	56.44
CDY15166	Canola	plasma membrane	54.63	56.26
Bra037338.1-P	Field mustard	plasma membrane	54.05	56.0
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	54.05	56.0
AT1G01610.1	Thale cress	plasma membrane	54.05	55.67
EES03906	Sorghum	golgi, peroxisome, plasma membrane	52.7	54.27
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	53.67	53.05
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	51.93	52.75
EER90914	Sorghum	plasma membrane	51.16	52.48
EER91628	Sorghum	cytosol	51.93	51.93
EES18341	Sorghum	plastid	46.33	45.98
EES18528	Sorghum	mitochondrion	37.07	38.63
EES01127	Sorghum	mitochondrion	42.28	38.29
KXG32181	Sorghum	endoplasmic reticulum, plasma membrane, plastid	40.35	37.66
EES08969	Sorghum	mitochondrion	41.31	36.83
KXG23710	Sorghum	plastid	42.08	36.15
KXG37209	Sorghum	mitochondrion	39.0	35.5
OQU86769	Sorghum	mitochondrion	33.98	32.77

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EntrezGene:8066516	UniProt:C5XS88	EnsemblPlants:EES04353
ProteinID:EES04353	ProteinID:EES04353.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020	GO:GO:0016021
GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791	GO:GO:0090447
InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	EnsemblPlantsGene:SORBI_3004G010300	SUPFAM:SSF69593	unigene:Sbi.14912	TMHMM:TMhelix
UniParc:UPI0001A8520B	RefSeq:XP_002451377.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:866843..869960

Molecular Weight (calculated)

55770.7 Da

IEP (calculated)

9.639

GRAVY (calculated)

0.174

Length

518 amino acids

Sequence
(BLAST)

001: MAPAASARFP PVSSYDASAR TRRTAAADLD GTLLASSSAF PYYFLVALEA GSCLRAAALL LVAPLLLALY TLVSEAAAIA LLAFVTFAGL RVRDVEAVAR
101: GVLPRHYAAG VRADTWTVFR GCGEGRRVVV TASPAVMVGE FVREFLGAEV AGTELETFSA FGAARFTGRI KAVLVGERKA EVVRRLFAGG EMPDVGLGDR
201: ESDHDFMAIC KEAYMVPPDK RAARAAADTL LSRSVFHDGR LVQRPDPAQA LFALAYLPLG FLLALFRVFF NLMMPLRLVR HTYRLTGIRL RVRGTPPPPP
301: APGAPGSLLV CNHRTALDPI ILSVALGRPV SCVTYSASRL STAISPIRAV ALSRDRATDA ARMAALLAEG DVVVCPEGTT CREPCLLRFS ALFAELTDRI
401: VPVAMEARQG TYYGSTARGW KWLDPYFFYM NPRPGYDVTF LPPLRPEETC GAGGRSAVDV ANHVQRVIAK ELGFQCTTLT RKDKYMKLAG NDGSVAARAK
501: KDAADDNAAT VTTTKKFV

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.