CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033915_P001	Maize	plasma membrane	96.44	95.3
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	90.1	89.04
TraesCS4A01G248400.1	Wheat	plasma membrane	89.7	88.48
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	90.3	85.88
TraesCS4B01G066500.1	Wheat	plasma membrane	90.3	83.67
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	82.38	81.41
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	64.16	80.8
PGSC0003DMT400073428	Potato	cytosol	45.94	76.82
VIT_01s0026g01210.t01	Wine grape	plasma membrane	74.26	74.55
Solyc04g005840.1.1	Tomato	plasma membrane	73.66	74.55
PGSC0003DMT400007387	Potato	plasma membrane	74.06	74.5
HORVU4Hr1G011110.4	Barley	plastid	90.89	73.56
PGSC0003DMT400003553	Potato	plasma membrane	69.9	73.54
KRH33389	Soybean	plasma membrane	73.86	73.28
KRG90133	Soybean	plasma membrane	73.86	72.85
Solyc02g087500.1.1	Tomato	plasma membrane	72.48	72.05
PGSC0003DMT400091384	Potato	plasma membrane	72.48	72.05
TraesCS2A01G015700.1	Wheat	mitochondrion	79.21	68.85
EER91628	Sorghum	cytosol	69.9	68.15
PGSC0003DMT400028782	Potato	plasma membrane	66.14	67.75
PGSC0003DMT400028781	Potato	plasma membrane	63.17	64.57
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	66.73	64.31
PGSC0003DMT400028779	Potato	plasma membrane	28.32	63.84
Solyc10g084900.1.1	Tomato	plasma membrane	60.2	62.55
PGSC0003DMT400028775	Potato	plasma membrane	60.4	62.37
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	56.83	57.52
EES03906	Sorghum	golgi, peroxisome, plasma membrane	54.26	54.47
EES04353	Sorghum	plastid	52.48	51.16
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	49.9	49.41
EES18341	Sorghum	plastid	47.33	45.79
GSMUA_Achr5P14930_001	Banana	plasma membrane	63.17	43.58
EES01127	Sorghum	mitochondrion	44.36	39.16
KXG32181	Sorghum	endoplasmic reticulum, plasma membrane, plastid	41.39	37.66
EES18528	Sorghum	mitochondrion	37.03	37.63
KXG37209	Sorghum	mitochondrion	40.4	35.85
OQU86769	Sorghum	mitochondrion	37.43	35.2
EES08969	Sorghum	mitochondrion	40.4	35.11
KXG23710	Sorghum	plastid	40.2	33.66

Protein Annotations

Gene3D:1.20.1440.100	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EntrezGene:8060511	UniProt:C5X1D0
EnsemblPlants:EER90914	ProteinID:EER90914	ProteinID:EER90914.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791
GO:GO:0090447	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710
PANTHER:PTHR15486	PANTHER:PTHR15486:SF43	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	EnsemblPlantsGene:SORBI_3001G099300	SUPFAM:SSF56784
SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0001A823AC	RefSeq:XP_002463916.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:7598408..7600784

Molecular Weight (calculated)

55125.6 Da

IEP (calculated)

9.010

GRAVY (calculated)

0.179

Length

505 amino acids

Sequence
(BLAST)

001: MAASPFPTVE KCSSTDRSGD TVVADLDGTL LCGRSSFPYF AHMAFETGGV LRLLLLIALA PLAGLLYYFV SEPAGIQVLI FASMAGARVA DIEAVARAVL
101: PKFYCADLHP ESWRVFSACG RRCVLTANPR IMVEAFLKEY VGTDVVVGTE LVVWRGRATG LVRSPGVLVG EQKADALRRT FGDDVAPEVG LGDRKTDYPF
201: MRLCKEGYVV PATPKLKPVP RENLPKPVVF HDGRLVQKPS PALALLTVLW IPIGFLLACL RIAAGALLPM RMVYHAFRAL GVRVTIRGNP PPPASRETGQ
301: TGVLFICSHR TLLDPIFLST ALGRPITAVT YSVSRLSEIL SPIRTVRLTR DRAADAAMIR RLLTEGDLVI CPEGTTCREP FLLRFSALFA ELTDEIVPVA
401: MENQMSMFHG TTARGWKGLD PFYFFMNPSP GYVVTFLNKL PAELTCNGGG KSSHEVANYI QRLIASTLSY ECTNFTRKDK YKALAGNDGT VVSKPNIDKN
501: KVMGC

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.