Factsheet for PGSC0003DMT400028775

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084900.1.1	Tomato	plasma membrane	88.14	88.68
PGSC0003DMT400028782	Potato	plasma membrane	79.35	78.7
PGSC0003DMT400028779	Potato	plasma membrane	35.38	77.23
PGSC0003DMT400028781	Potato	plasma membrane	77.1	76.32
PGSC0003DMT400007387	Potato	plasma membrane	69.94	68.13
PGSC0003DMT400003553	Potato	plasma membrane	63.39	64.58
PGSC0003DMT400091384	Potato	plasma membrane	66.05	63.58
EER90914	Sorghum	plasma membrane	62.37	60.4
PGSC0003DMT400073428	Potato	cytosol	36.81	59.6
Zm00001d033915_P001	Maize	plasma membrane	61.96	59.3
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	61.35	58.71
TraesCS4A01G248400.1	Wheat	plasma membrane	61.35	58.59
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	59.1	56.56
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	60.74	55.93
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	45.81	55.86
TraesCS4B01G066500.1	Wheat	plasma membrane	61.15	54.86
TraesCS4D01G280800.1	Wheat	peroxisome	53.99	52.8
TraesCS4A01G021500.1	Wheat	peroxisome	53.78	52.6
TraesCS4B01G282100.1	Wheat	peroxisome	53.78	52.6
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.81	52.45
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.6	52.25
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.4	52.05
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	55.21	51.82
EER91628	Sorghum	cytosol	54.81	51.74
Os03t0166600-00	Rice	cytosol	26.38	51.39
HORVU4Hr1G074470.4	Barley	plastid	54.4	50.76
HORVU1Hr1G032150.4	Barley	peroxisome	54.6	49.44
PGSC0003DMT400052335	Potato	cytosol	50.92	49.21
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	50.31	48.62
HORVU4Hr1G011110.4	Barley	plastid	61.76	48.4
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	51.74	48.28
PGSC0003DMT400000152	Potato	plasma membrane	48.67	47.51
TraesCS2A01G015700.1	Wheat	mitochondrion	54.6	45.96
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	36.4	44.95
Os10t0413400-00	Rice	plastid	55.01	43.6
PGSC0003DMT400044571	Potato	plasma membrane	44.17	39.71
GSMUA_Achr5P14930_001	Banana	plasma membrane	51.94	34.7
PGSC0003DMT400069796	Potato	plasma membrane	40.29	26.37

Protein Annotations

EntrezGene:102598322	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M1ARP0	PFAM:PF01553	PFAM:PF12710
EnsemblPlantsGene:PGSC0003DMG400011077	PGSC:PGSC0003DMG400011077	EnsemblPlants:PGSC0003DMT400028775	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000295AD81	RefSeq:XP_015166091.1
SEG:seg	:	:	:	:	:

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011077]

Coordinates

chr10:+:54253349..54254818

Molecular Weight (calculated)

55412.0 Da

IEP (calculated)

9.109

GRAVY (calculated)

0.179

Length

489 amino acids

Sequence
(BLAST)

001: MAITTFPMVE KCTSIDREND TVVTDLDGTL LRARNSFAYF ALLAFDVGGV LRLLFLLLAS PITWILYYFI SEFAGIQVIV FATFVWMKVS DVESAARHVL
101: PKFYLEDLHP ESWRVFSSCG KRCVLTATPR IMVEPFLKDY LGTDIVLGTE IQTYKGRATG FVKSPGVLVG KNKADTLSST FGDTQPEIGL GDRDTDIPFM
201: TLCNEGYFVP SNLKVKAVST KKLPKPIIFH DGRFIKKLTP LTSLFIIIWI PFGFLLACLR ISIGILLPIP LQYYAFWATG IRLIINGIPP LHIKKSKDQS
301: GVLFVCCHKT ILDNIFLSAA LDRPIPVITY STSQFFNIFS RIKTITLTGD RTSDASMIKH LLKQRDLTIF PEGTTNRGQF LLRFSSLFAE FTDEIMPVAI
401: ENKMSMFHGT TTRGWKWMDP FFFMMNPRPT YEITFLNKLS YEFTCKSGKS SHEVATYVQK VIGETLSYEC TTFTRKDKYM ALDTIVKNP

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.