Factsheet for PGSC0003DMT400091384

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003553	Potato	plasma membrane	94.49	100.0
PGSC0003DMT400073428	Potato	cytosol	59.06	99.34
Solyc02g087500.1.1	Tomato	plasma membrane	96.46	96.46
PGSC0003DMT400007387	Potato	plasma membrane	77.76	78.69
PGSC0003DMT400028782	Potato	plasma membrane	70.87	73.02
EER90914	Sorghum	plasma membrane	72.05	72.48
Zm00001d033915_P001	Maize	plasma membrane	71.65	71.23
PGSC0003DMT400028779	Potato	plasma membrane	31.1	70.54
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	70.87	70.45
PGSC0003DMT400028781	Potato	plasma membrane	68.11	70.04
TraesCS4A01G248400.1	Wheat	plasma membrane	70.47	69.92
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	70.28	67.23
PGSC0003DMT400028775	Potato	plasma membrane	63.58	66.05
TraesCS4B01G066500.1	Wheat	plasma membrane	70.47	65.69
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	51.57	65.34
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	64.76	64.38
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	65.75	64.11
EER91628	Sorghum	cytosol	65.16	63.9
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.98	63.6
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.98	63.6
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.58	63.21
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	60.63	61.72
TraesCS4D01G280800.1	Wheat	peroxisome	60.04	61.0
TraesCS4B01G282100.1	Wheat	peroxisome	60.04	61.0
TraesCS4A01G021500.1	Wheat	peroxisome	59.25	60.2
HORVU1Hr1G032150.4	Barley	peroxisome	62.8	59.07
HORVU4Hr1G074470.4	Barley	plastid	60.43	58.59
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	57.68	57.91
HORVU4Hr1G011110.4	Barley	plastid	70.67	57.53
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	59.25	57.44
TraesCS2A01G015700.1	Wheat	mitochondrion	63.19	55.25
PGSC0003DMT400052335	Potato	cytosol	54.33	54.55
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	42.52	54.55
Os10t0413400-00	Rice	plastid	63.98	52.67
Os03t0166600-00	Rice	cytosol	25.2	51.0
PGSC0003DMT400000152	Potato	plasma membrane	49.61	50.3
PGSC0003DMT400044571	Potato	plasma membrane	49.21	45.96
GSMUA_Achr5P14930_001	Banana	plasma membrane	60.04	41.67
PGSC0003DMT400069796	Potato	plasma membrane	43.9	29.85

Protein Annotations

EntrezGene:102593080	EntrezGene:102606136	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M1DMG9
PFAM:PF01553	PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400040955	PGSC:PGSC0003DMG400040955	EnsemblPlants:PGSC0003DMT400091384	PANTHER:PTHR15486
PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix
UniParc:UPI0002958C4A	RefSeq:XP_006338785.2	RefSeq:XP_006361145.2	:	:	:

Description

Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400040955]

Coordinates

chr6:-:54818218..54820640

Molecular Weight (calculated)

56173.9 Da

IEP (calculated)

9.529

GRAVY (calculated)

0.116

Length

508 amino acids

Sequence
(BLAST)

001: MAKTDSKKFP TIQQCESKGR EDQTVVADMD GTLLVGRSSF PYFALVAFEV GGISRLIFLI LASPLAGFLY YFISESAGIR VLVFATFVGM KVSDIESVAR
101: AVLPKFYSSD LHPETWRVFS SCGKRCVLTA NPRIMVEPVL KEYLSVDIVI GTEICTYKGR ATGFVNESGV LVGDNKAKAL QKAFGSKFTP HIGLGDRKTD
201: FPFMNLCKES YIVPPEPGVK PMSQDKLPKP IVFHDGRLVQ KPSPLMALII ILWIPVGFLL ACLRIAAGTL LPMPLVYYAF WSLGVRVIIK GNPPPPARKS
301: TGQTGVLFIS SHRTLLDPIF LSTALGRPIP AVTYSLSRLS EIISPIKTVR LSRDRITDAN MIKKLLQEGD LVICPEGTTC REPFLLRFSA LFAELTNELV
401: PVAMCNKMSM FHGTTARGWK GMDPFYFFMN PSPSYEVNFL NKWPYELTCK AGKSSHDVAN YIQRTIAATL SYECTNFTRK DKYMALAGND GTVTTKSEFA
501: SKKVTTGC

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.