Factsheet for PGSC0003DMT400028781

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028782	Potato	plasma membrane	93.32	93.51
PGSC0003DMT400028779	Potato	plasma membrane	41.3	91.07
PGSC0003DMT400028775	Potato	plasma membrane	76.32	77.1
PGSC0003DMT400007387	Potato	plasma membrane	72.47	71.31
PGSC0003DMT400003553	Potato	plasma membrane	67.81	69.79
PGSC0003DMT400073428	Potato	cytosol	41.9	68.54
PGSC0003DMT400091384	Potato	plasma membrane	70.04	68.11
EER90914	Sorghum	plasma membrane	64.57	63.17
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	64.57	62.43
TraesCS4A01G248400.1	Wheat	plasma membrane	64.37	62.11
Zm00001d033915_P001	Maize	plasma membrane	64.17	62.04
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	63.36	58.95
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	60.93	58.9
TraesCS4B01G066500.1	Wheat	plasma membrane	64.57	58.53
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	46.96	57.86
TraesCS4D01G280800.1	Wheat	peroxisome	57.69	57.0
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	59.92	56.81
TraesCS4B01G282100.1	Wheat	peroxisome	57.49	56.8
EER91628	Sorghum	cytosol	59.51	56.76
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.7	56.75
TraesCS4A01G021500.1	Wheat	peroxisome	57.29	56.6
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.5	56.56
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.3	56.36
HORVU4Hr1G074470.4	Barley	plastid	57.69	54.39
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	55.26	53.95
HORVU1Hr1G032150.4	Barley	peroxisome	58.3	53.33
PGSC0003DMT400052335	Potato	cytosol	54.25	52.96
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	55.67	52.48
HORVU4Hr1G011110.4	Barley	plastid	64.98	51.44
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	41.09	51.26
Os03t0166600-00	Rice	cytosol	25.3	49.8
TraesCS2A01G015700.1	Wheat	mitochondrion	58.3	49.57
PGSC0003DMT400000152	Potato	plasma membrane	49.6	48.9
Os10t0413400-00	Rice	plastid	58.7	47.0
PGSC0003DMT400044571	Potato	plasma membrane	48.79	44.3
GSMUA_Achr5P14930_001	Banana	plasma membrane	53.44	36.07
PGSC0003DMT400069796	Potato	plasma membrane	43.93	29.05

Protein Annotations

EntrezGene:102597999	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M1ARP3	PFAM:PF01553
PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400011079	PGSC:PGSC0003DMG400011079	EnsemblPlants:PGSC0003DMT400028781	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI00029666F9
RefSeq:XP_006339283.1	SEG:seg	:	:	:	:

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011079]

Coordinates

chr10:+:54239905..54241481

Molecular Weight (calculated)

54966.7 Da

IEP (calculated)

9.629

GRAVY (calculated)

0.205

Length

494 amino acids

Sequence
(BLAST)

001: MGITTSPTIE KCTLEGRARD TIVANLDGTL LRSKATFAYF ALVAFDVGGV LRLLFLLLVS PFFSILYYFI SESVGLQVII FVTFVGMKVS DIESAARAVL
101: PKFYSEDLHP ESWRVFSSCG KRCVLTSTPR IMVEPFLKDY LGVEIVLGTE IETYKGRATG IVRSPGVLVG KNKANALRTT FGDTQPDIGL GDRDTDIPFV
201: TLCKEGYIVP SNPKVKAVST NKLPKPIIFH DGRLIKKPTP LIPLLIILWI PFGFFLSCLR ACAGLLLPTP LQYYASWAMG VRLIIRGNPP PRIKKSKDQS
301: GVLFVCSHKT LCDAVLLSTV LGRPIPAVAY SLSRFSEIIA PIKTIRLTRE RGSDASIIKQ LLKEGDLTIF PEGTTCREPF LLRFSSLFAE LTNEIVPVAM
401: VNKMSMFHGT TARGWKWMDM FFSFLMNPRP TYEITFLNKL SYEFTCKSGK SSHEVANYVQ KVIAETLSYE CTIFTRKDKY IALAGNDGTV MKNS

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.