Factsheet for GSMUA_Achr5P27160_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P24330_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane	35.13	65.19
GSMUA_Achr8P06330_001	Banana	mitochondrion	34.61	63.38
GSMUA_Achr7P05580_001	Banana	cytosol	32.54	61.33
GSMUA_Achr11P...	Banana	mitochondrion	27.56	52.36
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	22.69	47.92
TraesCS3B01G173200.1	Wheat	mitochondrion	26.22	47.03
TraesCS3D01G155000.1	Wheat	mitochondrion	26.11	46.93
TraesCS3A01G146100.1	Wheat	mitochondrion	26.01	46.74
HORVU3Hr1G029770.4	Barley	endoplasmic reticulum, golgi	25.18	45.25
OQU86769	Sorghum	mitochondrion	25.18	45.25
VIT_07s0005g01760.t01	Wine grape	plasma membrane	24.15	44.55
CDY22016	Canola	plasma membrane	20.93	44.3
Bra036303.1-P	Field mustard	plasma membrane	20.93	44.3
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	20.73	43.96
CDY07108	Canola	plasma membrane	20.73	43.86
CDX89973	Canola	endoplasmic reticulum, golgi	20.62	43.74
CDY15240	Canola	endoplasmic reticulum, golgi	20.41	43.3
KRH68291	Soybean	mitochondrion	22.38	42.44
KRG96552	Soybean	plasma membrane	23.52	42.04
Os01t0299300-00	Rice	plastid	26.42	41.94
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	23.32	41.74
GSMUA_Achr3P23260_001	Banana	golgi, plastid, vacuole	13.26	41.69
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	23.52	41.42
KRH16642	Soybean	plasma membrane	21.24	41.25
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	22.18	41.15
CDY71692	Canola	golgi, plasma membrane	12.95	40.58
AT1G02390.1	Thale cress	plasma membrane	22.07	40.19
KRH69194	Soybean	golgi, plasma membrane, plastid	23.11	40.18
KRH31769	Soybean	golgi	22.9	39.75
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	20.52	39.21
KRH18844	Soybean	plasma membrane	20.1	38.57
GSMUA_Achr1P06780_001	Banana	plasma membrane	15.03	35.37
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	15.96	34.53
GSMUA_Achr10P...	Banana	plasma membrane	15.44	34.41
GSMUA_Achr8P27070_001	Banana	plastid	19.59	34.3
GSMUA_Achr3P16480_001	Banana	mitochondrion	17.72	33.6
GSMUA_Achr10P...	Banana	plasma membrane	11.09	33.13
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	14.71	32.87
GSMUA_Achr2P16430_001	Banana	plasma membrane	14.09	30.49
GSMUA_Achr10P...	Banana	plasma membrane	15.44	29.8
GSMUA_Achr5P14930_001	Banana	plasma membrane	14.82	19.54

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr5G27160_001	EnsemblPlants:GSMUA_Achr5P27160_001	EnsemblPlants:GSMUA_Achr5T27160_001	InterPro:IPR002885
InterPro:IPR011990	UniProt:M0T241	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR15486
PANTHER:PTHR15486:SF18	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF69593	TIGRFAMs:TIGR00756	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000295CF0C	SEG:seg	:	:	:	:

Description

Putative Probable glycerol-3-phosphate acyltransferase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G27160_001]

Coordinates

chr5:+:27729428..27736400

Molecular Weight (calculated)

108151.0 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.010

Length

965 amino acids

Sequence
(BLAST)

001: MNTRFSCRSF QPSLELRLHC SCIPITLTCL LPAPPTRPLC LSLLQSCTSV PHFLQIHAQI LRNRLFDDPF AAAELLRVSR TIPLGGTHYA RKLLSEIPHP
101: TTFAWNCILG GLADSPSPAS SLALFRRMLS SGARPSARTF PSLLKACARV AAREAGELLH GLMIKWAVDR DSFSTNGLIY MYCACPRYDL GRRVFDLSQE
201: RDVASWTLMI GGLAINGHGA EALELFGQME RDAVKPNEVT FIGVLYACSH GGLVEQARQC FDSMRAVYGL KPQIEHCGCM VDVLGRAGFL EEAVFLVQSM
301: ANDNAVLCGS LLSACLIHGN AKLGEYVVDR LVELRPDDGG VFVLLSNIYA ARGRWDDARK TRMLMKLRGL KKILGCSSTG MFMGLFMNST LENATEIYDM
401: SEEISSVWHQ GRRRAKPGSS PCQKRQRCAV GESAQCMLDP RECQARGIRI KQVKGGLKPW SKTNQNSIYI SKPSYPFSVK SMRLKDFFKS FLLLCRFLLP
501: RRPSTCHTNH GRSQRYPSLE SLPSQTVVCD VEGALLRTSS TFPYFMLVAL EAGGFLRGLL LLLLHPLISC LSHEVGIRIM VMVCFFGLRK EDFRVGRAML
601: PKFFLEQVGL EGFEVLRRGG RRVCVSSMPT VMVEGFLKEY LDVEVVLGRE LKVFGGYYTG LMEDGVIGFG HVDFAHHQLF THCKEVCLVG EAEKRRGHHP
701: LPRSQYPKPL VFHDGRIAFR PDAVSTLCMF LWLPLGFALA FARALVFLFL PYALSIPLLA SLGMHSRLIT SSDKEERRGD GSQLYICNHR TLLDALYISA
801: ALRRHVTATT YSVSPISEWF SPIRTVRLTR NREEDAARMK KLVQEGDLMI SREVVPVALE SWASMFYGTS TGKLKFLDPL YFLMNPFPCY EAEFMATVAT
901: GAIGGEECSS YEMANHLQAE IGRRLGFHCT SLTRKHKYVL LAGNEGTIER ERERTRDGDV RMERR

Best Arabidopsis Sequence Match ( AT4G01950.2 )
(BLAST)

001: MHCLKPNKEN TRRKEKKSKK KSFLQNPNMS AKISIFQALV FLFYRFILRR YRNSKPKYQN GPSSLLQSDL SRHTLIFNVE GALLKSDSLF PYFMLVAFEA
101: GGVIRSFLLF ILYPLISLMS HEMGVKVMVM VSFFGIKKEG FRAGRAVLPK YFLEDVGLEM FEVLKRGGKK IGVSDDLPQV MIEGFLRDYL EIDVVVGREM
201: KVVGGYYLGI MEDKTKHDLV FDELVRKERL NTGRVIGITS FNTSLHRYLF SQFCQEIYFV KKSDKRSWQT LPRSQYPKPL IFHDGRLAIK PTLMNTLVLF
301: MWGPFAAAAA AARLFVSLCI PYSLSIPILA FSGCRLTVTN DYVSSQKQKP SQRKGCLFVC NHRTLLDPLY VAFALRKKNI KTVTYSLSRV SEILAPIKTV
401: RLTRDRVSDG QAMEKLLTEG DLVVCPEGTT CREPYLLRFS PLFTEVSDVI VPVAVTVHVT FFYGTTASGL KALDPLFFLL DPYPTYTIQF LDPVSGATCQ
501: DPDGKLKFEV ANNVQSDIGK ALDFECTSLT RKDKYLILAG NNGVVKKN

Arabidopsis Description

ATGPAT3glycerol-3-phosphate acyltransferase 3 [Source:TAIR;Acc:AT4G01950]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.