Factsheet for TraesCS1D01G222100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G233800.1	Wheat	plastid	91.36	90.61
TraesCS3A01G147200.1	Wheat	plastid	93.42	90.08
TraesCS1A01G220600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	92.59	90.0
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	74.49	71.54
EES18528	Sorghum	mitochondrion	62.35	60.97
TraesCS2D01G136700.1	Wheat	mitochondrion	50.21	46.21
CDY71692	Canola	golgi, plasma membrane	28.4	44.81
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	39.09	41.76
CDY15240	Canola	endoplasmic reticulum, golgi	39.09	41.76
CDX89973	Canola	endoplasmic reticulum, golgi	38.89	41.54
Bra036303.1-P	Field mustard	plasma membrane	38.07	40.57
CDY22016	Canola	plasma membrane	38.07	40.57
VIT_07s0005g01760.t01	Wine grape	plasma membrane	43.42	40.34
CDY07108	Canola	plasma membrane	37.65	40.13
TraesCS3D01G155000.1	Wheat	mitochondrion	44.24	40.04
TraesCS4D01G143600.1	Wheat	mitochondrion	45.88	40.04
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	41.36	39.8
KRH18844	Soybean	plasma membrane	41.15	39.76
KRH16642	Soybean	plasma membrane	40.53	39.64
TraesCS5D01G099700.1	Wheat	plasma membrane	43.21	39.18
TraesCS3D01G333200.1	Wheat	mitochondrion	43.42	38.93
KRH68291	Soybean	mitochondrion	40.74	38.9
TraesCS7D01G498800.1	Wheat	mitochondrion	40.95	38.72
AT1G02390.1	Thale cress	plasma membrane	41.36	37.92
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	41.98	37.85
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	40.33	37.69
KRG96552	Soybean	plasma membrane	41.77	37.59
KRH69194	Soybean	golgi, plasma membrane, plastid	42.8	37.48
KRH31769	Soybean	golgi	42.8	37.41
TraesCS4D01G280800.1	Wheat	peroxisome	38.07	37.0
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	38.68	36.79
TraesCS5D01G512000.1	Wheat	mitochondrion	42.39	36.59
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	40.33	36.57
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	40.33	35.77
TraesCS1D01G282300.1	Wheat	plasma membrane	37.04	34.88
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	35.6	34.81
TraesCS6D01G043000.1	Wheat	mitochondrion	35.6	34.26
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	36.01	34.25
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	31.89	28.13
TraesCS3D01G225400.1	Wheat	mitochondrion	12.76	24.12

Protein Annotations

EnsemblPlants:TraesCS1D01G222100.1	EnsemblPlantsGene:TraesCS1D01G222100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	ncoils:Coil	PANTHER:PTHR15486	PANTHER:PTHR15486:SF19
SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:-:309922275..309923741

Molecular Weight (calculated)

52375.9 Da

IEP (calculated)

9.039

GRAVY (calculated)

0.231

Length

486 amino acids

Sequence
(BLAST)

001: MLSLHRVVKS NLVAGLLRLS RTAPTTMAAP AVAPPACLLG NGTKTVVLEV DALLLKSSPP SAATLFPPFF LIAVEAGSFA RGLLLLALYP FLHLMARDVL
101: EAMIMVSFCG LRDEAARIGR AVLPKYFSKE AARVEALEEA REGTTSEVVA AVSRSFPTVM VEAFLKDYVG FDAVIGREVK AGYGYFAGVM DDGNTYAERL
201: RAALKRAEEN TTYHYPKPMI FHDGRLAFTP TPVAALAMYV YLPFAVVLSV VRIAIYTLLP RRMIGPAAAL AGVRVRVTGA PPATANGENG ASGGRLYACN
301: HRTLLDPIAI SSALGKPVFA VTYSLSPLSE LLSPIPLLRL TRGRDEDRRR MSSLLGWGDV VGCPEGTTCR EPYLLRFPLF AELADEVSPV AVDERSTMFY
401: GTSTSPGAKC FDSVFFLMNP RPEYSVQFLE PVRTDNPRGS IEVANQVQGV LAGALGFTPT ALTRKDKYLL LAGNEGVVST KTSKVI

Best Arabidopsis Sequence Match ( AT1G02390.1 )
(BLAST)

001: MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE
101: MGLKTMVMLS FFGVKKESFR VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV GGYYLGIVED KKNLEIAFDK
201: VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY
301: SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV
401: VCPEGTTCRE PYLLRFSPLF SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR GVPDNGKVNF EVANHVQHEI
501: GNALGFECTN LTRRDKYLIL AGNNGVVKKK

Arabidopsis Description

GPAT2Probable glycerol-3-phosphate acyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ22]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.