Factsheet for TraesCS3D01G225300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G227400.1	Wheat	mitochondrion	94.96	94.96
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	94.96	94.96
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	90.49	83.33
TraesCS7D01G498800.1	Wheat	mitochondrion	73.51	76.65
Zm00001d011430_P001	Maize	mitochondrion	75.37	72.53
Zm00001d044136_P001	Maize	mitochondrion	73.51	72.29
EES01127	Sorghum	mitochondrion	74.07	69.41
TraesCS3D01G225400.1	Wheat	mitochondrion	33.02	68.87
Os01t0631400-01	Rice	mitochondrion	41.98	68.18
VIT_12s0142g00040.t01	Wine grape	plasma membrane	51.49	51.69
GSMUA_Achr8P27070_001	Banana	plastid	52.43	51.0
KRH14479	Soybean	plasma membrane	50.93	50.56
KRH73656	Soybean	plasma membrane	50.56	50.28
KRG98920	Soybean	mitochondrion	48.13	48.96
PGSC0003DMT400044571	Potato	plasma membrane	49.44	48.71
KRH46052	Soybean	mitochondrion, plasma membrane	47.95	48.22
Solyc07g056320.2.1	Tomato	plasma membrane	49.07	48.17
GSMUA_Achr3P16480_001	Banana	mitochondrion	43.84	46.17
CDY10206	Canola	plasma membrane	48.13	45.5
CDY06647	Canola	plasma membrane	48.32	45.36
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	47.95	45.01
AT1G06520.1	Thale cress	plasma membrane	48.88	44.79
TraesCS4D01G280800.1	Wheat	peroxisome	41.23	44.2
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	41.6	43.64
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.86	42.86
TraesCS5D01G099700.1	Wheat	plasma membrane	41.98	41.98
TraesCS3D01G333200.1	Wheat	mitochondrion	42.35	41.88
TraesCS1D01G282300.1	Wheat	plasma membrane	39.37	40.89
TraesCS2D01G136700.1	Wheat	mitochondrion	40.11	40.72
TraesCS3D01G155000.1	Wheat	mitochondrion	40.49	40.41
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	36.57	40.33
TraesCS4D01G143600.1	Wheat	mitochondrion	41.79	40.22
TraesCS6D01G043000.1	Wheat	mitochondrion	37.87	40.2
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	36.94	39.84
TraesCS5D01G512000.1	Wheat	mitochondrion	41.42	39.43
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	36.57	38.74
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	33.77	32.85

Protein Annotations

EnsemblPlants:TraesCS3D01G225300.1	EnsemblPlantsGene:TraesCS3D01G225300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	PFAM:PF01553
PFAM:PF12710	SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:5.2.1.3.1

Description

No Description!

Coordinates

chr3D:-:306498302..306511690

Molecular Weight (calculated)

59473.8 Da

IEP (calculated)

9.425

GRAVY (calculated)

0.141

Length

536 amino acids

Sequence
(BLAST)

001: MVFHAILPKI AVHWLINLYR AARKLRSNAF QYCRDSTSST KPSTEAISSS ERTMPSAADR TVVCDFHGGL LRSTGIFPYF MLVAFEGGSL LRALVLLCFF
101: PLVWILGERS DAGVRVMTFV TFVGLRPRDT DLVARAILPK FYMERLHAQV YDHLWLPAKR KVALTSTPRV MAECFLKEYM AANVVAGCEL QMVEVGRVWY
201: FTGLLCGTGP GPGLRQKTLR EAFEADGNMA DVGVVRGSNP LDQLCAPYCK ELYVVSWESA KTARLPRERY PKPLIFHDGR LAFLPTAPAM LAFFLFLPLG
301: FILSVIRISI GIVLPYNISF AASALAGVCF RTSGRRVQEA GAKRRGVLFV CTHRTLVDPI MLTAALQKPV PAVTYSLSRL SEIIAPIKTV RLTRDRDHDA
401: AMMSRLLEQG DLAVCPEGTT CREPYLLRFS PLFAELADDM EPVALDAQVT SLYGTTASGH KWLDPLAFFA NPVPAYRVEF LGPVPRDQTR AGGRTSAEVA
501: NWVQRRLGEA LGFECTGLSR RDKYIMLAGN DGVVRK

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.