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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06647 Canola plasma membrane 97.0 96.32
AT1G06520.1 Thale cress plasma membrane 86.42 83.76
VIT_12s0142g00040.t01 Wine grape plasma membrane 60.14 63.86
KRH73656 Soybean plasma membrane 60.49 63.64
KRH14479 Soybean plasma membrane 60.49 63.52
PGSC0003DMT400044571 Potato plasma membrane 58.02 60.48
Solyc07g056320.2.1 Tomato plasma membrane 57.5 59.71
KRG98920 Soybean mitochondrion 54.67 58.82
CDY71876 Canola cytosol, extracellular, mitochondrion 16.93 58.54
KRH46052 Soybean mitochondrion, plasma membrane 54.85 58.35
CDY71692 Canola golgi, plasma membrane 27.34 50.32
Zm00001d044136_P001 Maize mitochondrion 47.62 49.54
GSMUA_Achr8P27070_001 Banana plastid 47.62 49.0
Zm00001d011430_P001 Maize mitochondrion 47.62 48.47
TraesCS3A01G227400.1 Wheat mitochondrion 45.68 48.32
CDY71660 Canola cytosol, plasma membrane 23.46 48.19
TraesCS3D01G225300.1 Wheat mitochondrion, plasma membrane 45.5 48.13
TraesCS3B01G257000.2 Wheat mitochondrion, plasma membrane 45.33 47.95
CDX89973 Canola endoplasmic reticulum, golgi 37.74 47.03
CDY15240 Canola endoplasmic reticulum, golgi 37.57 46.81
TraesCS7B01G419500.1 Wheat mitochondrion, plasma membrane 43.74 46.7
TraesCS7D01G498800.1 Wheat mitochondrion 42.33 46.69
EES01127 Sorghum mitochondrion 46.56 46.15
CDY56848 Canola plasma membrane 32.98 45.95
CDY08528 Canola cytosol 32.8 45.93
CDY66042 Canola plasma membrane 32.45 45.1
CDY07108 Canola plasma membrane 35.98 44.74
CDY22016 Canola plasma membrane 35.45 44.08
HORVU3Hr1G056830.3 Barley cytosol, plasma membrane 44.8 43.64
Os01t0631400-01 Rice mitochondrion 25.22 43.33
CDY64226 Canola peroxisome 38.27 43.31
CDX93327 Canola golgi, peroxisome, plasma membrane 38.27 43.31
GSMUA_Achr3P16480_001 Banana mitochondrion 38.8 43.22
CDX74912 Canola peroxisome 38.1 43.11
CDY38016 Canola plasma membrane 37.57 42.18
CDY15166 Canola plasma membrane 37.04 41.75
CDY01076 Canola extracellular, plasma membrane 14.81 41.58
CDX90045 Canola plasma membrane 36.86 41.55
CDY69719 Canola cytosol, golgi, peroxisome 31.04 41.22
TraesCSU01G235900.1 Wheat extracellular, plasma membrane 21.69 41.14
CDY08476 Canola cytosol 8.99 40.8
CDY08475 Canola plasma membrane 30.34 39.18
TraesCS3D01G225400.1 Wheat mitochondrion 17.64 38.91
TraesCS3A01G227500.1 Wheat mitochondrion 16.4 37.5
CDX98902 Canola plasma membrane 35.8 36.45
CDY60435 Canola plasma membrane 36.16 36.22
TraesCS7A01G509500.1 Wheat mitochondrion 16.4 34.57
CDY56375 Canola mitochondrion 12.52 31.98
CDY22002 Canola mitochondrion 12.35 31.67
CDY01075 Canola cytosol, plasma membrane, plastid 8.29 29.94
Protein Annotations
EnsemblPlants:CDY10206EnsemblPlantsGene:GSBRNA2T00032026001GO:A0A078FA09GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016740GO:GO:0016746InterPro:Plipid/glycerol_acylTrfasePANTHER:PTHR15486PANTHER:PTHR15486:SF44
PFAM:PF01553ProteinID:CDY10206ProteinID:CDY10206.1SEG:segSignalP:SignalP-noTMSMART:SM00563
SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0004EEB061UniProt:A0A078FA09MapMan:5.2.1.3.1:
Description
BnaC05g04490DBnaC05g04490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA09]
Coordinates
chrLK032001:-:544384..546185
Molecular Weight (calculated)
63851.0 Da
IEP (calculated)
9.228
GRAVY (calculated)
0.049
Length
567 amino acids
Sequence
(BLAST)
001: MVFPELLVIL AEWVLYRLLA NSCYRAARKL RGYGFQLKNF LNLSKSQSQQ NTSHLLNNQQ QQQQNQDSLN PLFPSITKYE DTGCSVSPDD TLVCDIDGVL
101: LRQLSSKHFH AFFPYFMLVA FEGGSIIRAI ILLFSCSFLW ALPQETKLKV LTFITFSGLK VKDMDNVSRS VLSKFFLESL NFQVYNVWAR TEYSKVVFTS
201: LPQVMVERFL REHLNADDVI GTKLQQIEVM GRKVYTGLTS GSLVKHRAAK DYFDNNNKKK PVLGIGSSSS VQDHTLISIC KEVYVCNEED SMNTLPRERY
301: PKPLIFHDGR LAFLPTPSAT LAMFTWLPIG FFLAVFRILI GVLLPYHVAN FLAAISGVRI TFKTHNLYNG PPEKGKSGVL YVCNHRTLLD PVFLTTSLGK
401: PLTAVTYSLS KFSELIAPLK TVSLKRDRKK DGEAMQRLLS KGDLVVCPEG TTCREPYLLR FSPLFAELTE DIVPVAVDAR VSMFYGTTAS GLKCLDPIFF
501: LMNPRPVYCI EVLKKLPKEM TCAGGKSSFE VANFIQGELA RVLGFECTNL TRKDKYLVLA GNEGIVK
Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)
001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR
Arabidopsis Description
GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.