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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71660 Canola cytosol, plasma membrane 63.97 94.57
CDY08528 Canola cytosol 88.48 89.14
CDY56848 Canola plasma membrane 87.01 87.22
Bra002041.1-P Field mustard cytosol 99.51 80.72
Bra002040.1-P Field mustard plasma membrane 67.16 71.73
AT3G11430.1 Thale cress plasma membrane 87.99 71.51
KRH73056 Soybean cytosol, endoplasmic reticulum, plasma membrane 75.0 64.83
KRH15081 Soybean cytosol 75.0 64.83
VIT_13s0019g01990.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 74.02 62.01
CDY01075 Canola cytosol, plasma membrane, plastid 23.28 60.51
Solyc04g011600.2.1 Tomato plasma membrane 70.59 58.66
PGSC0003DMT400016230 Potato golgi, mitochondrion, plasma membrane 56.62 58.33
CDY08475 Canola plasma membrane 62.01 57.63
CDX98902 Canola plasma membrane 74.26 54.4
CDY60435 Canola plasma membrane 74.75 53.89
CDY71876 Canola cytosol, extracellular, mitochondrion 21.08 52.44
GSMUA_Achr2P16430_001 Banana plasma membrane 56.13 51.35
Solyc05g053030.1.1 Tomato plasma membrane 62.01 50.4
CDY08476 Canola cytosol 15.2 49.6
GSMUA_Achr6P34050_001 Banana cytosol, peroxisome, plasma membrane 52.45 49.54
Zm00001d010520_P001 Maize cytosol, endoplasmic reticulum, plasma membrane 59.56 48.8
TraesCS1B01G292200.1 Wheat plasma membrane 61.03 48.35
TraesCS1D01G282300.1 Wheat plasma membrane 60.78 48.06
GSMUA_Achr10P... Banana plasma membrane 37.99 47.99
TraesCS1A01G283100.1 Wheat plasma membrane 60.29 47.95
Zm00001d038366_P001 Maize plasma membrane 60.05 47.85
Os05t0457800-01 Rice cytosol, peroxisome, plasma membrane 61.03 47.7
EES18341 Sorghum plastid 60.29 47.13
CDY01076 Canola extracellular, plasma membrane 23.28 47.03
HORVU1Hr1G072590.2 Barley mitochondrion 60.29 44.65
CDX74912 Canola peroxisome 45.83 37.33
CDY64226 Canola peroxisome 45.83 37.33
CDX93327 Canola golgi, peroxisome, plasma membrane 45.83 37.33
CDY15166 Canola plasma membrane 44.12 35.79
CDX90045 Canola plasma membrane 44.12 35.79
CDY38016 Canola plasma membrane 44.12 35.64
CDY71692 Canola golgi, plasma membrane 25.74 34.09
CDX89973 Canola endoplasmic reticulum, golgi 37.5 33.63
CDY69719 Canola cytosol, golgi, peroxisome 35.05 33.49
CDY15240 Canola endoplasmic reticulum, golgi 37.01 33.19
CDY22016 Canola plasma membrane 36.52 32.68
CDY10206 Canola plasma membrane 45.1 32.45
CDY07108 Canola plasma membrane 36.03 32.24
CDY06647 Canola plasma membrane 44.85 32.05
PGSC0003DMT400069796 Potato plasma membrane 56.86 31.06
CDY56375 Canola mitochondrion 12.99 23.87
CDY22002 Canola mitochondrion 12.75 23.53
Protein Annotations
MapMan:35.1GO:A0A078JL08UniProt:A0A078JL08EnsemblPlants:CDY66042ProteinID:CDY66042ProteinID:CDY66042.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746EnsemblPlantsGene:GSBRNA2T00051218001PFAM:PF12710PANTHER:PTHR15486
PANTHER:PTHR15486:SF25InterPro:Plipid/glycerol_acylTrfaseSMART:SM00563SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0004EF0856
SEG:seg:::::
Description
BnaCnng49400DBnaCnng49400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JL08]
Coordinates
chrLK035054:-:18190..19885
Molecular Weight (calculated)
46027.6 Da
IEP (calculated)
9.522
GRAVY (calculated)
0.180
Length
408 amino acids
Sequence
(BLAST)
001: MVMEEARATP DSVVSEFEGT ILRNEDPFSY FMLVAFEASG LIRFAALLFL WSVITLLDVF SYKNAALKLM TFVATVGLRE PEIQSVARAV LPKFYMDDVS
101: IDTWKVYSSC KKKVVVTRMP RVMVEMFAKE HLKADEVIGS ELINYNHRNK NLELRPLPVI FHDGRLVKRP TPPTSLLILT WIPLGIILAA IRIFLGSVLP
201: FWTTPYVSKI LGGQVIVKGK PPQPPAAGNS GVLFVCTHRT LMDPVVLSYV LERTKIKQQL SKGDLVVCPE GTTCREPFLL RFSGLFAELT DRIVPVAMNY
301: RVGFFHATTA RGWKGLDPIF FFMNPRPVYE VTFLNQLPVE ATCSSGKRPH DVANYVQRIL AATLGFECTN FTRRDKYRVL AGNDGTVSYL SFLDQLKKVV
401: STFEPFLH
Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)
001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH
Arabidopsis Description
GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.