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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08528 Canola cytosol 96.07 96.54
CDY66042 Canola plasma membrane 87.22 87.01
CDY71660 Canola cytosol, plasma membrane 57.74 85.14
AT3G11430.1 Thale cress plasma membrane 90.66 73.51
KRH73056 Soybean cytosol, endoplasmic reticulum, plasma membrane 75.68 65.25
VIT_13s0019g01990.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 77.64 64.89
KRH15081 Soybean cytosol 75.18 64.83
CDY01075 Canola cytosol, plasma membrane, plastid 24.32 63.06
Solyc04g011600.2.1 Tomato plasma membrane 73.46 60.9
PGSC0003DMT400016230 Potato golgi, mitochondrion, plasma membrane 57.99 59.6
CDY08475 Canola plasma membrane 63.64 59.0
CDX98902 Canola plasma membrane 78.38 57.27
CDY60435 Canola plasma membrane 78.87 56.71
CDY71876 Canola cytosol, extracellular, mitochondrion 21.38 53.05
Solyc05g053030.1.1 Tomato plasma membrane 64.86 52.59
GSMUA_Achr2P16430_001 Banana plasma membrane 57.49 52.47
GSMUA_Achr10P... Banana plasma membrane 41.28 52.01
GSMUA_Achr6P34050_001 Banana cytosol, peroxisome, plasma membrane 54.3 51.16
CDY08476 Canola cytosol 15.48 50.4
Zm00001d010520_P001 Maize cytosol, endoplasmic reticulum, plasma membrane 61.43 50.2
Zm00001d038366_P001 Maize plasma membrane 62.41 49.61
CDY01076 Canola extracellular, plasma membrane 24.57 49.51
TraesCS1D01G282300.1 Wheat plasma membrane 62.16 49.03
TraesCS1B01G292200.1 Wheat plasma membrane 61.92 48.93
TraesCS1A01G283100.1 Wheat plasma membrane 61.67 48.93
Os05t0457800-01 Rice cytosol, peroxisome, plasma membrane 62.65 48.85
EES18341 Sorghum plastid 62.16 48.47
HORVU1Hr1G072590.2 Barley mitochondrion 61.67 45.55
CDX93327 Canola golgi, peroxisome, plasma membrane 48.89 39.72
CDX74912 Canola peroxisome 48.65 39.52
CDY64226 Canola peroxisome 48.65 39.52
CDY15166 Canola plasma membrane 47.67 38.57
CDX90045 Canola plasma membrane 47.67 38.57
CDY38016 Canola plasma membrane 47.67 38.42
CDY71692 Canola golgi, plasma membrane 27.52 36.36
CDY69719 Canola cytosol, golgi, peroxisome 37.59 35.83
CDX89973 Canola endoplasmic reticulum, golgi 39.31 35.16
CDY15240 Canola endoplasmic reticulum, golgi 39.07 34.95
CDY22016 Canola plasma membrane 38.82 34.65
CDY07108 Canola plasma membrane 38.08 33.99
CDY10206 Canola plasma membrane 45.95 32.98
CDY06647 Canola plasma membrane 45.7 32.57
PGSC0003DMT400069796 Potato plasma membrane 59.46 32.4
CDY56375 Canola mitochondrion 13.27 24.32
CDY22002 Canola mitochondrion 13.02 23.98
Protein Annotations
MapMan:35.1GO:A0A078J0Z9UniProt:A0A078J0Z9EnsemblPlants:CDY56848ProteinID:CDY56848ProteinID:CDY56848.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746EnsemblPlantsGene:GSBRNA2T00020134001PFAM:PF12710PANTHER:PTHR15486
PANTHER:PTHR15486:SF25InterPro:Plipid/glycerol_acylTrfaseSMART:SM00563SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0004EF2785
Description
BnaCnng31250DBnaCnng31250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0Z9]
Coordinates
chrLK033524:+:7499..9406
Molecular Weight (calculated)
45817.4 Da
IEP (calculated)
9.103
GRAVY (calculated)
0.303
Length
407 amino acids
Sequence
(BLAST)
001: MERARTSSDS VVSEFEGTIL KNQDPFSYFM LVAFEASGLI RFAVLLFLWP VITLLNVFTY KNAALKLMIF VSTVGLREPE IESVARAVLP KFYMDDVSMD
101: AWKVFSSCKE KVVVTRMPRV MVEMFAKEHL IADEVIGSEL ISYHHRTQQL ELRPLPVIFH DGRLVKRPTP ATALLILIWI PFGIILAAIR IFLGSILPLW
201: ATPYVSKIFG GQIIVKGKPP QAPSPGHSGV LFVCTHRTLM DPVVLSYVLG RSIPAVTYSI SRDLVVCPEG TTCREPFLLR FSALFAELTD RIVPVAMNYR
301: VGFFHATTAR GWKGLDPIFF FMNPRPVYEV TFLNQLPMEA TCSSGKSPHD VANYVQRILA ATLGFECTNF TRKDKYRVLA GNDGTVSYLS FLDQLKKVVS
401: TFEPFLH
Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)
001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH
Arabidopsis Description
GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.