CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	mitochondrion
Plant-mPloc:	endoplasmic reticulum, mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46052	Soybean	mitochondrion, plasma membrane	95.83	94.75
KRH14479	Soybean	plasma membrane	74.38	72.59
KRH73656	Soybean	plasma membrane	72.68	71.06
VIT_12s0142g00040.t01	Wine grape	plasma membrane	70.02	69.1
PGSC0003DMT400044571	Potato	plasma membrane	64.52	62.5
Solyc07g056320.2.1	Tomato	plasma membrane	64.14	61.9
CDY06647	Canola	plasma membrane	59.58	54.99
CDY10206	Canola	plasma membrane	58.82	54.67
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	59.2	54.64
AT1G06520.1	Thale cress	plasma membrane	59.01	53.16
GSMUA_Achr8P27070_001	Banana	plastid	54.84	52.45
Zm00001d044136_P001	Maize	mitochondrion	51.04	49.36
TraesCS7D01G498800.1	Wheat	mitochondrion	47.63	48.83
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	48.96	48.13
TraesCS3A01G227400.1	Wheat	mitochondrion	48.96	48.13
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	48.2	47.83
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	48.39	47.57
KRH55439	Soybean	plasma membrane	25.05	47.48
Zm00001d011430_P001	Maize	mitochondrion	50.09	47.4
GSMUA_Achr3P16480_001	Banana	mitochondrion	45.73	47.35
EES01127	Sorghum	mitochondrion	51.23	47.2
KRH68291	Soybean	mitochondrion	44.4	45.97
KRH49307	Soybean	plasma membrane	43.26	45.97
KRH33389	Soybean	plasma membrane	44.21	45.78
KRG90133	Soybean	plasma membrane	44.21	45.51
KRH16642	Soybean	plasma membrane	42.69	45.27
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	42.88	44.75
KRH75836	Soybean	cytosol, plasma membrane, plastid	41.75	44.72
KRH66036	Soybean	plasma membrane	42.13	44.58
KRG88817	Soybean	plasma membrane	23.72	44.33
KRH18844	Soybean	plasma membrane	41.75	43.74
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	48.2	43.64
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	44.4	43.41
KRH48117	Soybean	plasma membrane	40.99	43.29
KRH15081	Soybean	cytosol	38.71	43.22
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	38.52	43.01
KRH64978	Soybean	plasma membrane	40.8	43.0
KRH00171	Soybean	plastid	43.45	42.49
KRG96552	Soybean	plasma membrane	43.26	42.22
KRH69194	Soybean	golgi, plasma membrane, plastid	43.45	41.26
TraesCS3D01G225400.1	Wheat	mitochondrion	19.73	40.47
Os01t0631400-01	Rice	mitochondrion	25.24	40.3
KRH31769	Soybean	golgi	42.5	40.29
TraesCS3A01G227500.1	Wheat	mitochondrion	18.79	39.92
TraesCSU01G235900.1	Wheat	extracellular, plasma membrane	22.01	38.8
TraesCS7A01G509500.1	Wheat	mitochondrion	18.79	36.8

Protein Annotations

EntrezGene:100802208	MapMan:5.2.1.3.1	EMBL:ACUP02010934	EnsemblPlantsGene:GLYMA_18G107100	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143
GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787
GO:GO:0016791	GO:GO:0090447	UniProt:I1N0X0	EnsemblPlants:KRG98920	ProteinID:KRG98920	ProteinID:KRG98920.1
PFAM:PF01553	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593
TMHMM:TMhelix	UniParc:UPI000233F442	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:12047167..12050021

Molecular Weight (calculated)

60000.9 Da

IEP (calculated)

8.550

GRAVY (calculated)

0.125

Length

527 amino acids

Sequence
(BLAST)

001: MVWLANWVMN QVLVKSCYGF ARKLKSHGFH WGDLSSKPLH QPSPFPNIDK CDLECRGSQT LACDFHKVLL RTHSFFPYFM LVAFEGGSIF RAFFLLCSCP
101: MLWILNYEMK LRVMIFISFC GLRMKDMENT SRAVLPKFYL ENLNLEAYEV VASVGSRVFF TTMPKVMVEG FLKEYLNADA VIATELHTSG CYFTGLLSKS
201: GLLVKHSALM DYFGDTKPDL GIGNTSLHDQ LFISLCKEAY VVINEEGKVM PRNKYPKPLI FHDGRLAFLP TPSATLLMFM WLPLGFLMAI YRIFLGVFLC
301: CKFTLALGIW SGLILNFNDK NQQRSESNKG VLYVCSHRTL MDPIFLSITL GRRLTAVTYS LSKVSELIAP IRTMRLTRDR EQDGETMKRL LCEGDLVVFP
401: EGTTCREPYL LRFSSLFAEL ADEIVPVAMN AHVTMFYGTT ASGLKVLDPI FFFMNPWPRY DIQVLGKVPR ELTCAGGRSS HEVANYIQRQ LADALGFECT
501: NLTRRDKYMM LAGNEGVVQE KKGRRFC

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.