Factsheet for Solyc07g056320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044571	Potato	plasma membrane	93.96	94.3
VIT_12s0142g00040.t01	Wine grape	plasma membrane	69.78	71.35
KRH14479	Soybean	plasma membrane	68.13	68.89
KRH73656	Soybean	plasma membrane	67.95	68.83
KRG98920	Soybean	mitochondrion	61.9	64.14
KRH46052	Soybean	mitochondrion, plasma membrane	60.99	62.48
CDY06647	Canola	plasma membrane	60.26	57.62
CDY10206	Canola	plasma membrane	59.71	57.5
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	60.07	57.44
AT1G06520.1	Thale cress	plasma membrane	59.34	55.38
GSMUA_Achr8P27070_001	Banana	plastid	53.48	52.99
TraesCS7D01G498800.1	Wheat	mitochondrion	47.62	50.58
Solyc04g005840.1.1	Tomato	plasma membrane	45.97	50.3
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	48.72	50.09
Zm00001d044136_P001	Maize	mitochondrion	50.0	50.09
Solyc02g087500.1.1	Tomato	plasma membrane	46.34	49.8
TraesCS3A01G227400.1	Wheat	mitochondrion	48.53	49.44
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	48.17	49.07
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	48.17	49.07
Zm00001d011430_P001	Maize	mitochondrion	49.08	48.11
Solyc09g014350.2.1	Tomato	cytosol	44.32	48.02
EES01127	Sorghum	mitochondrion	50.18	47.9
GSMUA_Achr3P16480_001	Banana	mitochondrion	42.86	45.97
Solyc04g011600.2.1	Tomato	plasma membrane	41.03	45.62
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	47.44	44.5
Solyc10g084900.1.1	Tomato	plasma membrane	39.38	44.24
TraesCSU01G235900.1	Wheat	extracellular, plasma membrane	24.18	44.15
Solyc01g094700.2.1	Tomato	plasma membrane	40.11	43.71
Os01t0631400-01	Rice	mitochondrion	25.64	42.42
Solyc05g053030.1.1	Tomato	plasma membrane	37.91	41.24
TraesCS3D01G225400.1	Wheat	mitochondrion	17.77	37.74
TraesCS7A01G509500.1	Wheat	mitochondrion	17.77	36.06
TraesCS3A01G227500.1	Wheat	mitochondrion	16.3	35.89

Protein Annotations

MapMan:5.2.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791	GO:GO:0090447	UniProt:K4CGG5
PFAM:PF01553	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g056320.2	EnsemblPlants:Solyc07g056320.2.1	TMHMM:TMhelix	UniParc:UPI000276B069	SEG:seg

Description

Glycerol-3-phosphate acyltransferase 1 [Source:Projected from Arabidopsis thaliana (AT1G06520) UniProtKB/Swiss-Prot;Acc:Q9SHJ5]

Coordinates

chr7:-:64167013..64170660

Molecular Weight (calculated)

60951.2 Da

IEP (calculated)

9.030

GRAVY (calculated)

0.174

Length

546 amino acids

Sequence
(BLAST)

001: MTFAVKNTVF PMILLKLAEW FVYKLLANSC YKAAMEVKNS RIFFKNSSSF RSSHQIPIHP NISKCKNSRK SETVVCDIQS TLLRSESFFP YFMLIAFEGG
101: GILRALFLLL SSPLLFVLDF EAKLRVMVFI SFCGMKIKDV ECVGRAVLPK FYLENLNVRV YELMKSAGER MVFTSVPRVM VEGFLKDYLS VDCVKGTELH
201: CFGNYFSGFV SSSGILSKHR ALMEVVGEKK PDIGIGNSSF HDHLFISLCK EAYVVSKEDA TTTSSILPRE KYPKPLIFHD GRLAFLPTPL ATLAMFMWLP
301: IGIPLAIFRI LIGICLPYKV AVLLGKLSGI RLRVKGTDPP RSENDKGVLY VCTHRTLLDP VFLSTSLGKP LTAVTYSLSK MSEILAPIKT VRLTRSRQKD
401: GEAMQRLLSE GDLVVCPEGT TCREPYLLRF SSLFAELADE IVPVAMNTNV SMFYGTTASG LKCLDPIFFL MNPRPCYTVE ILGKLPKELT CAGGKSSHEV
501: ANYIQRQLGA ALGFECTNLT RRDKYLMLAG NEGVVEDHNS TINTSN

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.