Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AGP50753 | Barley | cytosol, mitochondrion, nucleus | 100.0 | 100.0 |
| HORVU0Hr1G033660.2 | Barley | mitochondrion, nucleus | 66.02 | 100.0 |
| HORVU0Hr1G036820.2 | Barley | mitochondrion, nucleus | 66.02 | 100.0 |
| HORVU4Hr1G045320.1 | Barley | mitochondrion, nucleus | 66.02 | 100.0 |
| HORVU4Hr1G045330.1 | Barley | cytosol, mitochondrion, nucleus | 100.0 | 100.0 |
| HORVU6Hr1G049180.1 | Barley | cytosol, mitochondrion, nucleus | 100.0 | 100.0 |
| TraesCS2B01G487300.1 | Wheat | cytosol, mitochondrion, nucleus | 100.0 | 100.0 |
| HORVU0Hr1G028080.1 | Barley | cytosol, mitochondrion | 65.05 | 98.53 |
| HORVU5Hr1G004560.1 | Barley | cytosol | 95.15 | 98.0 |
| CAA33994 | Rice | cytosol | 93.2 | 93.2 |
| ATCG00330.1 | Thale cress | cytosol | 78.64 | 81.0 |
| HORVU1Hr1G038030.1 | Barley | cytosol | 73.79 | 74.51 |
| VIT_16s0039g00380.t01 | Wine grape | cytosol, golgi, mitochondrion, nucleus | 40.78 | 70.0 |
| HORVU3Hr1G059190.1 | Barley | cytosol | 20.39 | 67.74 |
| HORVU0Hr1G029720.2 | Barley | extracellular | 50.49 | 49.06 |
Protein Annotations
| MapMan:17.7.2.2.14 | Gene3D:4.10.830.10 | EntrezGene:4525130 | ProteinID:AGP50753.1 | ProteinID:AMA20244.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019843 | GO:GO:0030529 | EnsemblPlantsGene:HORVU7Hr1G020150 | EnsemblPlants:HORVU7Hr1G020150.1 | HAMAP:MF_00537 | PFAM:PF00253 |
| ScanProsite:PS00527 | PANTHER:PTHR19836 | InterPro:Ribosomal_S14 | InterPro:Ribosomal_S14_CS | InterPro:Ribosomal_S14_bac/plastid | UniProt:S4Z890 |
| SUPFAM:SSF57716 | UniParc:UPI000008E482 | RefSeq:YP_874651.1 | SEG:seg | : | : |
Description
30S ribosomal protein S14, chloroplastic [Source:UniProtKB/TrEMBL;Acc:S4Z890]
Coordinates
chrchr7H:-:27368750..27369061
Molecular Weight (calculated)
12215.2 Da
IEP (calculated)
11.926
GRAVY (calculated)
-0.924
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKSLIQRE KKRQKLEQKY HLIRQSLKKK IRSKVSPLSL SEKTKMREKL QSLPRNSAPT RLHRRCFLTG RPRANYRHFG LSGHVLREMV YECLLPGATR
101: SSW
101: SSW
1: MAKKSLIYRE KKRQKLEKKY HLIRRSSKKE ISKIPSLSEK WKIHGKLQSP PRNSAPTRLH RRCFSTGRPR ANYRDFGLSG HILREMVQAC LLPGATRSSW
Arabidopsis Description
RPS1430S ribosomal protein S14, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4T5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.