Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g00380.t01 | Wine grape | cytosol, golgi, mitochondrion, nucleus | 51.0 | 85.0 |
| CAA33994 | Rice | cytosol | 85.0 | 82.52 |
| AGP50753 | Barley | cytosol, mitochondrion, nucleus | 81.0 | 78.64 |
| HORVU4Hr1G045330.1 | Barley | cytosol, mitochondrion, nucleus | 81.0 | 78.64 |
| HORVU6Hr1G049180.1 | Barley | cytosol, mitochondrion, nucleus | 81.0 | 78.64 |
| HORVU7Hr1G020150.1 | Barley | cytosol, mitochondrion, nucleus | 81.0 | 78.64 |
| TraesCS2B01G487300.1 | Wheat | cytosol, mitochondrion, nucleus | 81.0 | 78.64 |
| HORVU5Hr1G004560.1 | Barley | cytosol | 76.0 | 76.0 |
| HORVU0Hr1G033660.2 | Barley | mitochondrion, nucleus | 50.0 | 73.53 |
| HORVU0Hr1G036820.2 | Barley | mitochondrion, nucleus | 50.0 | 73.53 |
| HORVU4Hr1G045320.1 | Barley | mitochondrion, nucleus | 50.0 | 73.53 |
| HORVU0Hr1G028080.1 | Barley | cytosol, mitochondrion | 49.0 | 72.06 |
| HORVU3Hr1G059190.1 | Barley | cytosol | 19.0 | 61.29 |
| TraesCS1B01G405300.1 | Wheat | cytosol | 61.0 | 59.22 |
| HORVU1Hr1G038030.1 | Barley | cytosol | 60.0 | 58.82 |
| HORVU0Hr1G029720.2 | Barley | extracellular | 38.0 | 35.85 |
Protein Annotations
| MapMan:17.7.2.2.14 | Gene3D:4.10.830.10 | EntrezGene:844771 | UniProt:A0A1B1W4T5 | ProteinID:ANW47788.1 | ArrayExpress:ATCG00330 |
| EnsemblPlantsGene:ATCG00330 | RefSeq:ATCG00330 | TAIR:ATCG00330 | RefSeq:ATCG00330-TAIR-G | EnsemblPlants:ATCG00330.1 | TAIR:ATCG00330.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0019843 | GO:GO:0030529 | HAMAP:MF_00537 | RefSeq:NP_051057.1 | PFAM:PF00253 |
| ScanProsite:PS00527 | PANTHER:PTHR19836 | Symbol:RPS14 | InterPro:Ribosomal_S14 | InterPro:Ribosomal_S14_CS | InterPro:Ribosomal_S14_bac/plastid |
| SUPFAM:SSF57716 | UniParc:UPI000013488C | : | : | : | : |
Description
RPS1430S ribosomal protein S14, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4T5]
Coordinates
chrPt:-:36938..37240
Molecular Weight (calculated)
11743.5 Da
IEP (calculated)
11.812
GRAVY (calculated)
-0.969
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKKSLIYRE KKRQKLEKKY HLIRRSSKKE ISKIPSLSEK WKIHGKLQSP PRNSAPTRLH RRCFSTGRPR ANYRDFGLSG HILREMVQAC LLPGATRSSW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.