Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G038030.1 | Barley | cytosol | 92.23 | 93.14 |
| TraesCS2B01G487300.1 | Wheat | cytosol, mitochondrion, nucleus | 76.7 | 76.7 |
| HORVU0Hr1G029720.2 | Barley | extracellular | 69.9 | 67.92 |
| ATCG00330.1 | Thale cress | cytosol | 59.22 | 61.0 |
| VIT_16s0039g00380.t01 | Wine grape | cytosol, golgi, mitochondrion, nucleus | 22.33 | 38.33 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G405300.1 | EnsemblPlantsGene:TraesCS1B01G405300 | Gene3D:4.10.830.10 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:Ribosomal_S14 |
| PANTHER:PTHR19836 | PFAM:PF00253 | SUPFAM:SSF57716 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1B:-:633720914..633721225
Molecular Weight (calculated)
12005.6 Da
IEP (calculated)
10.839
GRAVY (calculated)
-0.756
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKKFDSEG EEATEIRTEI SYDSSIFKKK IRSKVSPLSL SEKTKMREKL QSLPRNSAPT RLHRRCFLTG RPRANYRHFG LFGHVLREMV YECLLPGATR
101: SSW
101: SSW
1: MAKKSLIYRE KKRQKLEKKY HLIRRSSKKE ISKIPSLSEK WKIHGKLQSP PRNSAPTRLH RRCFSTGRPR ANYRDFGLSG HILREMVQAC LLPGATRSSW
Arabidopsis Description
RPS1430S ribosomal protein S14, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4T5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.