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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G057390.1 Barley cytosol 6.38 12.73
Zm00001d045357_P001 Maize cytosol 0.94 11.54
Protein Annotations
EnsemblPlants:HORVU7Hr1G077060.4EnsemblPlantsGene:HORVU7Hr1G077060PANTHER:PTHR33566PANTHER:PTHR33566:SF3SEG:segUniParc:UPI000B45FC4C
UniProt:A0A287WZ11MapMan:35.1::::
Description
No Description!
Coordinates
chrchr7H:-:450616441..450646177
Molecular Weight (calculated)
107241.0 Da
IEP (calculated)
7.614
GRAVY (calculated)
-0.278
Length
956 amino acids
Sequence
(BLAST)
001: FGMFGYGGTI ASMHLGRTAI VSSKTKESRK VFTLHLSREA LLEKSSSKLS WKTAGGVRDP SEEQLALSPH RSFTQVEIHG LNRHLELGKL QGFLKDISCQ
101: FIQYDEDNGS MSTRRPVQFE VNGVDLAEIQ ESEVTLTNLH SSNGPDFILH LKFSCTSTNA ASRQAHARIK CVYFPIVKGK ESIDSILDKL SENALGVKEN
201: FDNFSRVSIR RLGRLLPDAR WGPLPFMEPK QSKGQKAELL KRCCKRVKCF VETDAGFNPT LSKTDLAQHD IFTNALRCFD GSCRNDSSVE EVSVDARKDE
301: RSLNRTQLEK QYHDWIITMH AKYDVEMDGG DDEHTVIINP SNKERLGISK DVQVIRVHTS VRRKGKTWRR GDHLKIQPGV VARTKNNFYS SKSIFYGTLE
401: YVVVEGLQGD ICGEARLICR SIECPGDQGC LLEVGQDSMH LNIKESFSFP VIMIDDNKCQ TMEEDSWCQM LKKKSGKAPA CIEVLRNLQG NALAVDGDLP
501: FEEVIMAGYN HPREVIAVIR PQNATTCSTS LLDKRYILKD DDLEMALEIN HLSGSKDHLH AKLIYKKLKK PSSRNSINGL YIFQLSEERS MFTKSGVYSI
601: IFSVRCRDST VIKHEAKITV CPNSNTRHWK LSCDADWSAE NAVLDIRLGM PVQCLAARSL DLYGNGIPFL DIDKAVITIL GGDDILANVK DIKVDLSTDL
701: LTLYIRDFLV KTNILDRLRP NYEAMLKISL CDSEFSHPCK VKPGIPSTIN MDMSLAWEKN LTPGEVIDDA LLEVLDHCGN HVEEGTELRV YTVGLSFVDK
801: YGPVRKVNSE GFVDLRGLLK VVSGFGSKVS LTIFHNKKKI FNRSFQIAIR NLKAVKVPES CRAGTFLENI IFEVSVCDGV IDESIHGPRH TLSIRSNQLK
901: HVEGAQYTFA HGRCVLPHAQ VPDEPGTVSF VAYHTHFADL ETIIQVPILQ YRSVCS
Best Arabidopsis Sequence Match ( AT5G24280.2 )
(BLAST)
0001: MSSRRSVKRS LVLDDDDDED IFYNFKVLLP NGTSVKLTLK NPEPEISMQS FVNLVKKEYD NARKDCLLMS KRMKVDWNSG GKFHLESNGG KMKGIVRFAA
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
Arabidopsis Description
GMI1Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.