CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67497	Soybean	plasma membrane	97.2	97.2
VIT_07s0005g04710.t01	Wine grape	plasma membrane	68.07	80.45
KRH19646	Soybean	plasma membrane	67.68	75.14
Solyc09g064270.2.1	Tomato	mitochondrion	54.07	74.43
KRH32260	Soybean	plasma membrane	69.47	72.51
AT2G20300.1	Thale cress	plasma membrane	66.54	70.3
CDY39767	Canola	plasma membrane	65.27	70.08
CDY31977	Canola	plasma membrane	65.9	70.0
Bra036687.1-P	Field mustard	plasma membrane	65.52	69.97
CDX81963	Canola	plasma membrane	65.39	69.84
Bra036461.1-P	Field mustard	plasma membrane	65.52	69.59
CDY05735	Canola	plasma membrane	65.52	69.59
CDY03314	Canola	plasma membrane	65.01	69.43
Bra031115.1-P	Field mustard	plasma membrane	64.89	69.11
CDY13879	Canola	plasma membrane	64.89	69.01
Os04t0509000-01	Rice	cytosol, plasma membrane	24.43	59.08
GSMUA_Achr5P17780_001	Banana	cytosol, plasma membrane, plastid	34.86	57.32
TraesCS2D01G362200.1	Wheat	plasma membrane	51.27	54.46
Os02t0815900-01	Rice	plasma membrane	51.15	54.4
KXG26687	Sorghum	plasma membrane	50.38	54.17
KXG31348	Sorghum	plasma membrane	50.76	53.77
TraesCS2A01G364300.1	Wheat	plasma membrane	50.89	53.76
HORVU6Hr1G090290.4	Barley	plastid	49.49	53.66
TraesCS6B01G425900.1	Wheat	plasma membrane	50.76	53.56
TraesCS6D01G371500.2	Wheat	plasma membrane	50.38	53.51
Zm00001d018472_P002	Maize	plasma membrane	50.51	53.5
TraesCS6A01G386800.1	Wheat	plasma membrane	50.25	53.38
Zm00001d051925_P001	Maize	plasma membrane	49.24	52.16
KRH44145	Soybean	plasma membrane	33.97	52.15
KRH02710	Soybean	cytosol, mitochondrion, plastid	13.23	52.0
TraesCS2B01G382700.1	Wheat	plasma membrane	52.29	51.63
Zm00001d003072_P001	Maize	plasma membrane	47.58	50.75
KRH27064	Soybean	plasma membrane	22.01	43.69
KRH23315	Soybean	plasma membrane	41.35	42.59
KRH22269	Soybean	plasma membrane	21.63	42.39
KRH10013	Soybean	plasma membrane	42.11	42.22
KRH47116	Soybean	plasma membrane	44.91	41.63
KRH33971	Soybean	plastid	21.25	37.87
KRG92824	Soybean	plasma membrane	20.48	36.51
KRH31783	Soybean	plasma membrane	31.42	35.44
KRH69205	Soybean	plasma membrane	31.17	35.25
KRH52372	Soybean	plasma membrane	18.45	35.11
KRH61701	Soybean	plasma membrane	18.45	34.69
KRH09675	Soybean	plasma membrane	19.08	34.48
KRH23629	Soybean	plasma membrane	18.32	33.96
KRH15798	Soybean	plasma membrane	18.7	33.41
KRG96539	Soybean	plasma membrane	30.53	33.29
KRH05253	Soybean	plasma membrane	18.45	32.08
KRH68274	Soybean	plasma membrane	30.15	32.07
KRH44150	Soybean	cytosol	5.47	29.86
KRH19175	Soybean	plasma membrane	46.56	28.82
KRH37393	Soybean	plasma membrane	46.95	28.81
KRH12398	Soybean	plasma membrane	45.93	27.79
KRH65720	Soybean	extracellular, plasma membrane	9.92	25.91

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100815554	MapMan:18.4.1.18	Gene3D:3.30.200.20	EMBL:ACUP02012136	EnsemblPlantsGene:GLYMA_19G170500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	UniProt:I1N9X8	InterPro:IPR000719	EnsemblPlants:KRG95786	ProteinID:KRG95786
ProteinID:KRG95786.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF10	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000233F44E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:43127519..43134055

Molecular Weight (calculated)

86139.9 Da

IEP (calculated)

8.174

GRAVY (calculated)

-0.212

Length

786 amino acids

Sequence
(BLAST)

001: MTAGGCSAGI SPPAGHSSKP LLSPDDALRW CRVRRERMPV SVVFLLALLN LLFSCQVKSI SLSVSFASSE RAKMWLVKPS SGPSSAPVPS PSYHGPHVTP
101: RPRHHYHHRH HHSMRPYVAA PPPSKDQACD QTCTDPLTSS PFGSPCGCVF PMKIRLTLDV APYAVFPVMT ELENEIALGT YLEQSQVKIM GATADSQNQG
201: RTIVDINLVP LGEKFDNTTA ALTYERFWHK KVPLNRSLFG DYAVVYIIYP GMPSSPPYGS LTGSSPSQSV DGILPVSANF VSKNQKMNLR TIIIIALSSF
301: VLLLVLVGAF SIILKWRKTG RPSSAVGPAF TSSLNKRSGL GSMLSSSITS STSISLMSTM ATSLLSVKTF SLSELEKATD KFSSKRVLGE GGFGRVYSGT
401: LEDGAEIAVK MLTRDNHQNG DREFIAEVEM LSRLHHRNLV KLIGICIEGR RRCLVYELVR NGSVESHLHG DDKIKGMLDW EARMKIALGA ARGLAYLHED
501: SNPRVIHRDF KASNVLLEDD FTPKVSDFGL AREATEGSNH ISTRVMGTFG YVAPEYAMTG HLLVKSDVYS YGVVLLELLT GRKPVDMSQP QGQENLVTWA
601: RPMLTSREGV EQLVDPSLAG SYNFDDMAKV AAIASMCVHS EVTQRPFMGE VVQALKLIYN DTDETCGDYC SQKDSSAQES DFRGDLAPSD SSWWNAGGLT
701: PRITYGQASS FITMEYSSGP LEEMENRPFS TSSLIGDEIS LPIRHGNRSG PLRTVRNKLS LYRFTGSRSE HGGPSSKPNW NDGYWV

Best Arabidopsis Sequence Match ( AT2G20300.1 )
(BLAST)

001: MRNFAMLLLL ILLLHSLASF PICFARLFPM SLPFTRSKAH QMHFFHPYLN PSVAPTPSPA FSPNPSRIPP LRHKGHHRHR RWHLRRNATA VSPSSHDCQQ
101: TCVEPLTSTP FGSPCGCVFP MKVQLLLSVA PFSIFPVTNE LEIEVAAGTY LEQSQVKIMG ASADSENQGK TVVDINLVPL GEKFDNTTAT LIYQRFRHKK
201: VPLNETVFGD YEVTHISYPG IPSSSPNGDV TGDAPGGLPI PINATTFANK SQGIGFRTIA IIALSGFVLI LVLVGAISII VKWKKIGKSS NAVGPALAPS
301: INKRPGAGSM FSSSARSSGS DSLMSSMATC ALSVKTFTLS ELEKATDRFS AKRVLGEGGF GRVYQGSMED GTEVAVKLLT RDNQNRDREF IAEVEMLSRL
401: HHRNLVKLIG ICIEGRTRCL IYELVHNGSV ESHLHEGTLD WDARLKIALG AARGLAYLHE DSNPRVIHRD FKASNVLLED DFTPKVSDFG LAREATEGSQ
501: HISTRVMGTF GYVAPEYAMT GHLLVKSDVY SYGVVLLELL TGRRPVDMSQ PSGEENLVTW ARPLLANREG LEQLVDPALA GTYNFDDMAK VAAIASMCVH
601: QEVSHRPFMG EVVQALKLIY NDADETCGDY CSQKDSSVPD SADFKGDLAP SDSSWWNLTP RLRYGQASSF ITMDYSSGPL EDMENRPHSA SSIPRVGGLI
701: LPNRSGPLRP MRSRRNFFRL RGSMSEHGGP SSSRHLWSGN GDWL

Arabidopsis Description

ALE2Receptor-like serine/threonine-protein kinase ALE2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWW0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.