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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0195200-01 Rice mitochondrion 47.38 34.38
Solyc09g064270.2.1 Tomato mitochondrion 60.0 34.15
TraesCS2D01G362200.1 Wheat plasma membrane 75.69 33.24
KXG26687 Sorghum plasma membrane 74.77 33.24
TraesCS2A01G364300.1 Wheat plasma membrane 75.69 33.06
Zm00001d003072_P001 Maize plasma membrane 74.77 32.97
TraesCS2B01G382700.1 Wheat plasma membrane 76.62 31.28
VIT_07s0005g04710.t01 Wine grape plasma membrane 60.62 29.62
CDY39767 Canola plasma membrane 59.69 26.5
CDY31977 Canola plasma membrane 60.0 26.35
Bra036461.1-P Field mustard plasma membrane 60.0 26.35
CDX81963 Canola plasma membrane 59.38 26.22
Bra036687.1-P Field mustard plasma membrane 59.38 26.22
CDY05735 Canola plasma membrane 59.69 26.22
AT2G20300.1 Thale cress plasma membrane 60.0 26.21
Os05t0207700-01 Rice plasma membrane 34.15 26.18
Bra031115.1-P Field mustard plasma membrane 59.38 26.15
CDY13879 Canola plasma membrane 59.38 26.12
CDY03314 Canola plasma membrane 59.08 26.09
Os02t0182600-00 Rice cytosol 6.77 25.58
KRH19646 Soybean plasma membrane 53.85 24.72
KRG95786 Soybean nucleus 59.08 24.43
KRH67497 Soybean plasma membrane 58.46 24.17
KRH32260 Soybean plasma membrane 53.54 23.11
Os02t0815900-01 Rice plasma membrane 51.69 22.73
Os05t0398800-01 Rice nucleus, plasma membrane, plastid 31.69 20.98
Os01t0709500-03 Rice plastid 47.38 20.92
Os05t0319700-01 Rice plasma membrane 28.0 19.04
Os08t0285600-01 Rice plasma membrane 20.0 17.15
Protein Annotations
Gene3D:1.10.510.10MapMan:50.2.7ProteinID:BAF15189.1ProteinID:BAS90019.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os04g0509000EnsemblPlants:Os04t0509000-01PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF10InterPro:Prot_kinase_domUniProt:Q0JBU8SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0000DD9181SEG:seg:::
Description
Similar to Pto kinase interactor 1. (Os04t0509000-01)
Coordinates
chr4:+:25456824..25459820
Molecular Weight (calculated)
35309.2 Da
IEP (calculated)
5.372
GRAVY (calculated)
-0.422
Length
325 amino acids
Sequence
(BLAST)
001: YGPLDFDTRM KIALGAARGL AYLHEDANPH VIHRDFKASN VLLENDFTPK VADFGLAKEA SEGMDHISTQ VMGTFGYVAP EYAMTGHLLV KSDVYSYGVV
101: LLELLSGRKP VDMTQPPGSE NLVTWARPLL TDRDGLQQLV DPSMPAASYG FEKLAKAAAI ASMCVHVEAS HRPFMGEVVQ ALKLIYNGNN DDTCTSGSFG
201: GGGGEEYEDE EASSPWNNRS WSHDFAATPP PASRRLAFPR APARPTTMDY SSDPADGAAG TSSASARRQR STSSLVLDKI ESLAAYDWSG PLRASRGRNF
301: YRLRGSMSEH GGHPSEDCSM EGYWM
Best Arabidopsis Sequence Match ( AT2G20300.1 )
(BLAST)
001: MRNFAMLLLL ILLLHSLASF PICFARLFPM SLPFTRSKAH QMHFFHPYLN PSVAPTPSPA FSPNPSRIPP LRHKGHHRHR RWHLRRNATA VSPSSHDCQQ
101: TCVEPLTSTP FGSPCGCVFP MKVQLLLSVA PFSIFPVTNE LEIEVAAGTY LEQSQVKIMG ASADSENQGK TVVDINLVPL GEKFDNTTAT LIYQRFRHKK
201: VPLNETVFGD YEVTHISYPG IPSSSPNGDV TGDAPGGLPI PINATTFANK SQGIGFRTIA IIALSGFVLI LVLVGAISII VKWKKIGKSS NAVGPALAPS
301: INKRPGAGSM FSSSARSSGS DSLMSSMATC ALSVKTFTLS ELEKATDRFS AKRVLGEGGF GRVYQGSMED GTEVAVKLLT RDNQNRDREF IAEVEMLSRL
401: HHRNLVKLIG ICIEGRTRCL IYELVHNGSV ESHLHEGTLD WDARLKIALG AARGLAYLHE DSNPRVIHRD FKASNVLLED DFTPKVSDFG LAREATEGSQ
501: HISTRVMGTF GYVAPEYAMT GHLLVKSDVY SYGVVLLELL TGRRPVDMSQ PSGEENLVTW ARPLLANREG LEQLVDPALA GTYNFDDMAK VAAIASMCVH
601: QEVSHRPFMG EVVQALKLIY NDADETCGDY CSQKDSSVPD SADFKGDLAP SDSSWWNLTP RLRYGQASSF ITMDYSSGPL EDMENRPHSA SSIPRVGGLI
701: LPNRSGPLRP MRSRRNFFRL RGSMSEHGGP SSSRHLWSGN GDWL
Arabidopsis Description
ALE2Receptor-like serine/threonine-protein kinase ALE2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWW0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.