CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 28499913

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42154	Soybean	mitochondrion	66.87	65.47
KRH58272	Soybean	mitochondrion	60.43	62.15
Bra037768.1-P	Field mustard	mitochondrion	53.99	59.66
AT5G64210.1	Thale cress	mitochondrion	60.74	56.09
KRH62683	Soybean	mitochondrion	55.21	56.07
VIT_12s0142g00430.t01	Wine grape	mitochondrion	61.96	54.74
CDY18720	Canola	mitochondrion	58.9	52.89
CDX81216	Canola	mitochondrion	56.75	36.71

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	EntrezGene:548077	ProteinID:AAP68983.1	EMBL:ACUP02004791	InterPro:AOX
InterPro:AOX_sf	EnsemblPlantsGene:GLYMA_08G072200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0008150
GO:GO:0008152	GO:GO:0009916	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	GO:GO:0070469	GO:GO:0102721	InterPro:IPR038659	EnsemblPlants:KRH42153	ProteinID:KRH42153
ProteinID:KRH42153.1	PFAM:PF01786	PANTHER:PTHR31803	PANTHER:PTHR31803:SF6	UniProt:Q7XZQ1	TMHMM:TMhelix
UniParc:UPI00001AA535	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:5530019..5532577

Molecular Weight (calculated)

37117.5 Da

IEP (calculated)

8.921

GRAVY (calculated)

-0.318

Length

326 amino acids

Sequence
(BLAST)

001: MKNVLVRSAA RALLGGGGRS YYRQLSTAAI VEQRHQHGGG AFGSFHLRRM STLPEVKDQH SEEKKNEVND TSNAVVTSYW GITRPKVRRE DGTEWPWNCF
101: MPWDSYHSDV SIDVTKHHTP KSLTDKVAFR AVKFLRVLSD IYFKERYGCH AMMLETIAAV PGMVGGMLLH LKSLRKFQHS GGWIKALLEE AENERMHLMT
201: MVELVKPSWH ERLLIFTAQG VFFNAFFVFY LLSPKAAHRF VGYLEEEAVI SYTQHLNAIE SGKVENVPAP AIAIDYWRLP KDATLKDVVT VIRADEAHHR
301: DVNHFASDIH HQGKELKEAP APIGYH

Best Arabidopsis Sequence Match ( AT5G64210.1 )
(BLAST)

001: MSQLITKAAL RVLLVCGRGN CNMFVSSVSS TSVMKSPYEI TAPMRIHDWC GGFGDFKIGS KHVQGNFNLR WMGMSSASAM EKKDENLTVK KGQNGGGSVA
101: VPSYWGIETA KMKITRKDGS DWPWNCFMPW ETYQANLSID LKKHHVPKNI ADKVAYRIVK LLRIPTDIFF QRRYGCRAMM LETVAAVPGM VGGMLLHLKS
201: IRKFEHSGGW IKALLEEAEN ERMHLMTMME LVKPKWYERL LVMLVQGIFF NSFFVCYVIS PRLAHRVVGY LEEEAIHSYT EFLKDIDNGK IENVAAPAIA
301: IDYWRLPKDA TLKDVVTVIR ADEAHHRDVN HFASDIRNQG KELREAAAPI GYH

Arabidopsis Description

AOX2Ubiquinol oxidase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22049]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.