CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18720	Canola	mitochondrion	59.13	82.09
AT5G64210.1	Thale cress	mitochondrion	51.59	73.65
CDY46328	Canola	mitochondrion	38.89	60.68
CDY34257	Canola	mitochondrion	38.69	60.37
KRH42154	Soybean	mitochondrion	39.48	59.76
Solyc01g105220.2.1	Tomato	mitochondrion	40.28	58.33
PGSC0003DMT400032705	Potato	mitochondrion	40.08	57.22
KRH58272	Soybean	mitochondrion	35.91	57.1
KRH42153	Soybean	mitochondrion	36.71	56.75
VIT_12s0142g00430.t01	Wine grape	mitochondrion	41.27	56.37
CDY69421	Canola	mitochondrion	38.69	56.36
CDX92940	Canola	mitochondrion	39.29	55.93
CDY53287	Canola	mitochondrion	35.32	55.8
CDY68662	Canola	mitochondrion	35.32	55.8
CDY10636	Canola	mitochondrion	38.89	54.44
CDY37409	Canola	mitochondrion	38.89	54.44

Protein Annotations

EnsemblPlants:CDX81216	EnsemblPlantsGene:GSBRNA2T00134682001	Gene3D:1.20.1260.140	GO:A0A078CVR5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0055114	InterPro:AOX	InterPro:AOX_sf
InterPro:IPR038659	PANTHER:PTHR31803	PANTHER:PTHR31803:SF6	PFAM:PF01786	ProteinID:CDX81216	ProteinID:CDX81216.1
SEG:seg	UniParc:UPI0004EECF7B	MapMan:2.4.2.2	:	:	:

Description

BnaC09g06270D

Coordinates

chrLK031824:-:147485..151646

Molecular Weight (calculated)

57850.0 Da

IEP (calculated)

10.258

GRAVY (calculated)

-0.544

Length

504 amino acids

Sequence
(BLAST)

001: MSQLAARTGL RALLVHSRVN RNMFMRCVSA VKNGEDTKKP MPVHDWCGGF VDFNIRSEHV QVYLIGDFNM RWRRMCSASA TEKKDEKPRI DKVKKDQDGG
101: GSVAVPSYWG IETAKMKIAR KDGSKWPWNC FMPWETHQAD LTIDFKKHHV PENMADKIAY VIVKILHHFT FKSSYKTLLF CPQRRYGCRA MMLETVAAVP
201: GMVGGMLLHL KSIRRFEHSG GWIKALLEEA ENERMHLMTM MELVKPKWYE RLLVILVQGV FFSSFFTCYV VSPRLAHRIV GYLEEEAIHS YTEFLKDIDD
301: GKIENVKAPA IAIDYWRLPE DATLKDVVTV IRADEAHHRD VNHFASDIRN QGKELREAAA PIVRKEELWN RLQSHGGQEA VVLEGEVAVP VGGPEMIIGK
401: ERDYRKRSRR CSASPARRSR SPRSASPPKA SHEMRRSKER SLTPLPRSRS PRSPSLEKAS PERKRNDRFP SPRDKARSQS PYADVGMTAY LRRRHGVSKH
501: VCLC

Best Arabidopsis Sequence Match ( AT5G64210.1 )
(BLAST)

001: MSQLITKAAL RVLLVCGRGN CNMFVSSVSS TSVMKSPYEI TAPMRIHDWC GGFGDFKIGS KHVQGNFNLR WMGMSSASAM EKKDENLTVK KGQNGGGSVA
101: VPSYWGIETA KMKITRKDGS DWPWNCFMPW ETYQANLSID LKKHHVPKNI ADKVAYRIVK LLRIPTDIFF QRRYGCRAMM LETVAAVPGM VGGMLLHLKS
201: IRKFEHSGGW IKALLEEAEN ERMHLMTMME LVKPKWYERL LVMLVQGIFF NSFFVCYVIS PRLAHRVVGY LEEEAIHSYT EFLKDIDNGK IENVAAPAIA
301: IDYWRLPKDA TLKDVVTVIR ADEAHHRDVN HFASDIRNQG KELREAAAPI GYH

Arabidopsis Description

AOX2Ubiquinol oxidase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22049]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.