Factsheet for PGSC0003DMT400032705

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105220.2.1	Tomato	mitochondrion	80.17	81.32
KRH42154	Soybean	mitochondrion	64.02	67.87
KRH58272	Soybean	mitochondrion	58.36	64.98
AT5G64210.1	Thale cress	mitochondrion	61.19	61.19
PGSC0003DMT400047562	Potato	mitochondrion	47.88	60.57
Bra037768.1-P	Field mustard	mitochondrion	50.14	60.0
PGSC0003DMT400019707	Potato	mitochondrion	52.97	58.26
CDY18720	Canola	mitochondrion	58.92	57.3
PGSC0003DMT400019708	Potato	mitochondrion	56.37	55.9
CDX81216	Canola	mitochondrion	57.22	40.08

Protein Annotations

Gene3D:1.20.1260.140	EntrezGene:102581100	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469
GO:GO:0102721	InterPro:IPR038659	UniProt:M1AXV2	PFAM:PF01786	EnsemblPlantsGene:PGSC0003DMG400012558	PGSC:PGSC0003DMG400012558
EnsemblPlants:PGSC0003DMT400032705	PIRSF:PIRSF005229	PANTHER:PTHR31803	PANTHER:PTHR31803:SF6	TMHMM:TMhelix	UniParc:UPI000295A16E
RefSeq:XP_006351780.1	SEG:seg	:	:	:	:

Description

Alternative oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400012558]

Coordinates

chr1:-:81916714..81920957

Molecular Weight (calculated)

40358.9 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.190

Length

353 amino acids

Sequence
(BLAST)

001: MSQLLVRSVM RRLVSGGTCN RCISSVSAAA AVVFREVHKP SSESVVMMSS QRLRFSGQWW RMMCFTSEPP SKNSTTSSAV RKEDEKLSGD SVEKMEGEDK
101: VALSSYWGVS RPKITKEDGS VWPWNCFMPW ETYQADLSID LSKHHVPKTF LDKVAYWTVK LLRIPTDLFF KKKYGCRAMM LETVAGVPGM VGGMLLHLRS
201: LRKFEQSGGW IKALLEEAEN ERMHLMTMVE LVQPKWYERL LVIAVQGVFF NFYFVLYLLS PKLAHRVVGY LEEEAIHSYT LYLNDIDRGE IENVPAPAIA
301: IDYWRLPKDA TLKDVITVIR ADEAHHRDVN HFASDIHYQG KKLQEAAAPI GYH

Best Arabidopsis Sequence Match ( AT5G64210.1 )
(BLAST)

001: MSQLITKAAL RVLLVCGRGN CNMFVSSVSS TSVMKSPYEI TAPMRIHDWC GGFGDFKIGS KHVQGNFNLR WMGMSSASAM EKKDENLTVK KGQNGGGSVA
101: VPSYWGIETA KMKITRKDGS DWPWNCFMPW ETYQANLSID LKKHHVPKNI ADKVAYRIVK LLRIPTDIFF QRRYGCRAMM LETVAAVPGM VGGMLLHLKS
201: IRKFEHSGGW IKALLEEAEN ERMHLMTMME LVKPKWYERL LVMLVQGIFF NSFFVCYVIS PRLAHRVVGY LEEEAIHSYT EFLKDIDNGK IENVAAPAIA
301: IDYWRLPKDA TLKDVVTVIR ADEAHHRDVN HFASDIRNQG KELREAAAPI GYH

Arabidopsis Description

AOX2Ubiquinol oxidase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22049]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.