CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016232_P001	Maize	mitochondrion	23.53	25.16
Os11t0648100-01	Rice	cytosol, plastid	31.18	23.98
KRH34024	Soybean	cytosol	84.12	22.2
KRG92784	Soybean	cytosol	83.53	22.15
CDX86181	Canola	cytosol	70.0	19.44
VIT_14s0030g01360.t01	Wine grape	cytosol	72.35	19.22
Bra009980.1-P	Field mustard	cytosol	70.0	18.86
CDX80676	Canola	cytosol	69.41	18.79
AT5G27950.1	Thale cress	cytosol	68.24	18.56
GSMUA_Achr8P06780_001	Banana	cytosol	63.53	17.85
EES10187	Sorghum	nucleus	63.53	17.85
PGSC0003DMT400057842	Potato	nucleus	64.71	17.43
Solyc01g098080.2.1	Tomato	nucleus	64.71	17.43
TraesCS4A01G167600.1	Wheat	cytosol	60.0	17.32
TraesCS1D01G349600.1	Wheat	cytosol	61.18	17.22
TraesCS1B01G360700.2	Wheat	cytosol	61.18	16.97
TraesCS4D01G147500.1	Wheat	cytosol	60.59	16.94
Zm00001d048731_P011	Maize	nucleus, plastid	61.18	15.12
KRG99459	Soybean	cytosol	31.76	4.58
KRH45559	Soybean	cytosol	32.94	4.34
KRH69671	Soybean	cytosol	31.76	4.22
KRH74497	Soybean	cytosol	31.18	4.14

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	EMBL:ACUP02003574	EnsemblPlantsGene:GLYMA_06G205200	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	UniProt:K7KW84	EnsemblPlants:KRH54733	ProteinID:KRH54733	ProteinID:KRH54733.1	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF528	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI00023C38EC	:

Description

hypothetical protein

Coordinates

chr6:-:19395089..19396158

Molecular Weight (calculated)

19073.8 Da

IEP (calculated)

9.212

GRAVY (calculated)

-0.435

Length

170 amino acids

Sequence
(BLAST)

001: MCVFAYGQTG TGKTFTMDGT NEEPRIVPRA LEEFFRQASL DNSSSFTFTM SMLEVYMGNL RDLLSPRQSS RPHEQYMTKS TSWTNVNEAS SRSHSLTRIN
101: IFRHGDALEA KSEVSKLWMI DLEGCKQLLK TGAKGLTLDE GRAINLSLSA LGDVVAALKR KRCHVPYRNS

Best Arabidopsis Sequence Match ( AT5G27950.1 )
(BLAST)

001: MLISAEKGEI LIPQSPLSSE SVVPLVYTDV NVVPEHESNQ LEKSISNLEE EVFELKLKLK SLDEKRKQVL NKIIDTKGSI RVFCRVRPFL LTERRPIREP
101: VSFGPDNVVI RSAGSSKEFE FDKVFHQSAT QEEVFGEVKP ILRSALDGHN VCVLAYGQTG TGKTFTMDGT SEQPGLAPRA IKELFNEASM DQTHSVTFRM
201: SMLEIYMGNL KDLLSARQSL KSYEASAKCN LNIQVDSKGS VEIEGLTEVE VMDFTKARWW YNKGRRVRST SWTNVNETSS RSHCLTRITI FRRGDAVGSK
301: TEVSKLWMID LGGSERLLKT GAIGQTMDEG RAINLSLSAL GDVIAALRRK KGHVPYRNSK LTQILKDSLG TRSKVLMLVH ISPRDEDVGE TICSLSFTKR
401: ARAVESNRGL TAELQKLREK KISELEEEME ETQEGCKKIK ARLQEVECLV NEHKKLFWIT NDKYLEDIEK KAISPLDHLK DTDATPISSD KLVKIRKSSG
501: FVPRFMTSTV ASRQRQTMSE KEINAKAQSI RSVAKNLTQF STSQSLSLSD SRSKALLRRS YTKPLQAAAN SGTPPETPKR HIKDNSLQRK NMNDTSSPRS
601: KMVTSSDPNV RAKLCHHKRR MSSLT

Arabidopsis Description

KIN14UKinesin-like protein KIN-14U [Source:UniProtKB/Swiss-Prot;Acc:Q8W0Y9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.