CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009980.1-P	Field mustard	cytosol	100.0	96.99
CDX80676	Canola	cytosol	97.22	94.75
AT5G27950.1	Thale cress	cytosol	78.92	77.28
KRH54733	Soybean	nucleus	19.44	70.0
VIT_14s0030g01360.t01	Wine grape	cytosol	57.03	54.53
Os11t0648100-01	Rice	cytosol, plastid	19.61	54.3
PGSC0003DMT400057842	Potato	nucleus	54.74	53.09
KRH34024	Soybean	cytosol	54.9	52.17
KRG92784	Soybean	cytosol	54.09	51.64
Zm00001d016232_P001	Maize	mitochondrion	13.07	50.31
Solyc01g098080.2.1	Tomato	nucleus	51.31	49.76
EES10187	Sorghum	nucleus	45.91	46.45
TraesCS4A01G167600.1	Wheat	cytosol	44.61	46.35
TraesCS1D01G349600.1	Wheat	cytosol	44.77	45.36
TraesCS1B01G360700.2	Wheat	cytosol	45.1	45.02
TraesCS4D01G147500.1	Wheat	cytosol	44.61	44.9
GSMUA_Achr8P06780_001	Banana	cytosol	43.95	44.46
Zm00001d048731_P011	Maize	nucleus, plastid	41.83	37.21
CDY54364	Canola	cytosol	33.17	25.63
CDY50030	Canola	cytosol	32.68	25.22
CDY56014	Canola	nucleus	32.52	23.8
CDY10550	Canola	cytosol	32.52	23.78
CDY14565	Canola	cytosol	24.18	11.69
CDY08791	Canola	cytosol	23.86	11.57
CDX78382	Canola	cytosol	22.88	11.16
CDX81180	Canola	cytosol	22.88	11.14

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078DA84	EnsemblPlants:CDX86181	ProteinID:CDX86181	ProteinID:CDX86181.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00144248001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF528	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EED3AF	SEG:seg

Description

BnaA06g28980D

Coordinates

chrLK031845:+:209420..213051

Molecular Weight (calculated)

68947.6 Da

IEP (calculated)

10.095

GRAVY (calculated)

-0.594

Length

612 amino acids

Sequence
(BLAST)

001: MSVPESFESP QPVPLVYTDV TVVPEHERNE LEKSISSLEG EVLELKSKLK SLDDKRKEVL NKIIDTKGSI RVFCRVRPFL STERRPIREP VSFGSDNVVV
101: RSAGVRKEFE FDKVFHQSAT QEDVFGEVKP ILRSALDGHN VCVLAYGQTG TGKTFTMDGT NEQPGLAPRA IKELFNEASM DHTHSVTFTM SMLEIYMGNL
201: KDLLSARQPL RFNEASAKCN LNIQVDSKGS VEIEGLTEVE VPDFTKARWW YNKGRRVRST SWTNVNEASS RSHCLTRITI FRRGDGVGSK TEVSKLWMID
301: LGGSERLLKT GAIGQTLDEG RAINLSLSAL GDVIAALRRK KGHVPYRNSK LTQILKDSLG TRSKVLMLVH ISPRDEDVGE TICSLSFTKR ARAIESNRGL
401: TEELRKLREK KISELEEEMR DTQESCKKII TRLQEAECLL SDNKKLLRTT HEKYEEDIEE KFLSPINHLK ESDATPKSSD KLVKISKSSG YVPRFMTSTV
501: TSRLRQTMSE KEINARPQSI RSVVKTLTQI STSQSLSLSD SRSRGLLRRS YTKPLQAAAK SGTPETPKRD VKDTSLQKKN ISDTPKSKMV TSSDPNVRAK
601: LCYHRRRMSS LT

Best Arabidopsis Sequence Match ( AT5G27950.1 )
(BLAST)

001: MLISAEKGEI LIPQSPLSSE SVVPLVYTDV NVVPEHESNQ LEKSISNLEE EVFELKLKLK SLDEKRKQVL NKIIDTKGSI RVFCRVRPFL LTERRPIREP
101: VSFGPDNVVI RSAGSSKEFE FDKVFHQSAT QEEVFGEVKP ILRSALDGHN VCVLAYGQTG TGKTFTMDGT SEQPGLAPRA IKELFNEASM DQTHSVTFRM
201: SMLEIYMGNL KDLLSARQSL KSYEASAKCN LNIQVDSKGS VEIEGLTEVE VMDFTKARWW YNKGRRVRST SWTNVNETSS RSHCLTRITI FRRGDAVGSK
301: TEVSKLWMID LGGSERLLKT GAIGQTMDEG RAINLSLSAL GDVIAALRRK KGHVPYRNSK LTQILKDSLG TRSKVLMLVH ISPRDEDVGE TICSLSFTKR
401: ARAVESNRGL TAELQKLREK KISELEEEME ETQEGCKKIK ARLQEVECLV NEHKKLFWIT NDKYLEDIEK KAISPLDHLK DTDATPISSD KLVKIRKSSG
501: FVPRFMTSTV ASRQRQTMSE KEINAKAQSI RSVAKNLTQF STSQSLSLSD SRSKALLRRS YTKPLQAAAN SGTPPETPKR HIKDNSLQRK NMNDTSSPRS
601: KMVTSSDPNV RAKLCHHKRR MSSLT

Arabidopsis Description

KIN14UKinesin-like protein KIN-14U [Source:UniProtKB/Swiss-Prot;Acc:Q8W0Y9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.