CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55550.1	CDX89318	AT4G26630.1	25387881
AT1G55550.1	CDX94304	AT4G26630.1	25387881
AT1G55550.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10550	Canola	cytosol	92.22	92.11
Bra030851.1-P	Field mustard	nucleus	88.76	89.08
PGSC0003DMT400046268	Potato	mitochondrion	11.12	71.54
CDY54364	Canola	cytosol	63.4	66.92
CDY50030	Canola	cytosol	63.16	66.58
Solyc01g049830.2.1	Tomato	mitochondrion	8.73	56.59
AT1G55550.1	Thale cress	cytosol	57.54	56.0
VIT_06s0004g00050.t01	Wine grape	cytosol	19.14	51.45
Os01t0260100-01	Rice	cytosol	10.17	43.37
HORVU3Hr1G036020.11	Barley	cytosol	24.64	38.15
OQU86633	Sorghum	cytosol	35.53	36.04
Zm00001d040312_P007	Maize	cytosol	35.05	35.05
TraesCS3A01G177700.1	Wheat	cytosol	34.81	35.02
TraesCS3D01G183100.2	Wheat	cytosol	34.81	35.02
TraesCS3B01G207300.1	Wheat	cytosol	34.45	34.66
CDX86181	Canola	cytosol	23.8	32.52
GSMUA_Achr8P21500_001	Banana	cytosol	34.57	32.36
CDX80676	Canola	cytosol	23.68	31.53
CDX78382	Canola	cytosol	18.66	12.43
CDX81180	Canola	cytosol	18.66	12.41
CDY08791	Canola	cytosol	18.06	11.97
CDY14565	Canola	cytosol	18.06	11.93

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078IZG9	UniProt:A0A078IZG9	EnsemblPlants:CDY56014	ProteinID:CDY56014
ProteinID:CDY56014.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00017674001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF391	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EDF26F
SEG:seg	:	:	:	:	:

Description

BnaA08g29230DBnaA08g29230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZG9]

Coordinates

chrLK033448:-:4541..8413

Molecular Weight (calculated)

94350.2 Da

IEP (calculated)

8.590

GRAVY (calculated)

-0.581

Length

836 amino acids

Sequence
(BLAST)

001: MERTRSKRVQ NLPETVHSLI GLRSHLTSSW VKSVSNIAKN VSSSSEISST SKEEDDSAFI EEQSIRNQLS TLTVQVNDQN KRRRQILNEF LDLKGNIRVF
101: CRVKPLDSKN MRAPVASDTR NVFIKLTESK RKTYNFDRVF QPDSSQDDVF LEIEPVIKSV MDGYNACIFA YGQTGTGKTF TMEGLPESPG IVPRAIKGLF
201: KQVEESNHKF VIKFSMLEIY MGNLRDLLVS QGTKPIGPIP PSLLIHTNPK GEIDIENLVT RKVNDFDEVF KLYKLGCRNR ATAFTNSNSA SSRSHCMIRV
301: SITCAGATER RRVRNKIWLV DLGGSERVLK TKATGRRFDE GKAINLSLSA LGDVINSLQR KNAHIPYRNS KLTQVLKDSL GQDSKTLMLV HIGRKEDDLC
401: ETICSLDFAT RAKNVHLGQE ESKEAQEKKE TVMMNLQKMM ETIEKDRETT LKEIRYLNET LEKLSGKPHV TEEAEEVDEI REEIQVTPKL RRNKSRRASD
501: VFCSFMRPTA SSNRRLSGAD FSSISNSPGS KSRRNSMAHV RSESVCLPMM KNVYDSLCDS SERSVSKSTC AMSQNRADDA ATVYSQDISE CDIKLVVSEH
601: KTEVQQTGQG SARKACSKIG IFEKNVNQKT EFSRINSWLR SQSENRSCVL DKKPRRLNKN ISMGRSSNGD QTLEDIEESK TEEAGIKHPL LLKDVFELEY
701: MCSAETEDQI LSKYPNPNEE DYASLHHLPS FRYDGLSQHI DDAWFGVARS ANREQDSHAS GLLLELKQPL PNSQRGLTFV EEVVPLLLRP QGILVQRGRG
801: AHTFMEKLEA LCYRTLVGVG LIDVSYGSDF FNGLTQ

Best Arabidopsis Sequence Match ( AT1G55550.1 )
(BLAST)

001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK

Arabidopsis Description

KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.