Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G137900.1 | |
| TraesCS4B01G148100.1 | |
| TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G55550.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
| AT1G55550.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
| AT1G55550.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G207300.1 | Wheat | cytosol | 97.23 | 97.23 |
| TraesCS3D01G183100.2 | Wheat | cytosol | 96.87 | 96.87 |
| HORVU3Hr1G036020.11 | Barley | cytosol | 59.33 | 91.3 |
| Os01t0260100-01 | Rice | cytosol | 18.05 | 76.53 |
| OQU86633 | Sorghum | cytosol | 69.19 | 69.78 |
| Zm00001d040312_P007 | Maize | cytosol | 67.75 | 67.34 |
| PGSC0003DMT400046268 | Potato | mitochondrion | 10.35 | 66.15 |
| Solyc01g049830.2.1 | Tomato | mitochondrion | 8.3 | 53.49 |
| VIT_06s0004g00050.t01 | Wine grape | cytosol | 19.25 | 51.45 |
| GSMUA_Achr8P21500_001 | Banana | cytosol | 40.91 | 38.07 |
| CDY50030 | Canola | cytosol | 35.74 | 37.45 |
| CDY54364 | Canola | cytosol | 35.5 | 37.25 |
| AT1G55550.1 | Thale cress | cytosol | 37.06 | 35.86 |
| CDY56014 | Canola | nucleus | 35.02 | 34.81 |
| CDY10550 | Canola | cytosol | 34.9 | 34.65 |
| Bra030851.1-P | Field mustard | nucleus | 34.42 | 34.33 |
| Bra038000.1-P | Field mustard | cytosol | 30.81 | 34.27 |
| TraesCS4A01G167600.1 | Wheat | cytosol | 24.19 | 34.13 |
| TraesCS7A01G174900.1 | Wheat | cytosol | 19.61 | 12.65 |
Protein Annotations
| MapMan:20.1.3.12 | Gene3D:3.40.850.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 |
| InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PRINTS:PR00380 |
| PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF737 | SMART:SM00129 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3A01G177700 |
| EnsemblPlants:TraesCS3A01G177700.1 | TIGR:cd14688 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:201500056..201505829
Molecular Weight (calculated)
93779.7 Da
IEP (calculated)
8.001
GRAVY (calculated)
-0.627
Length
831 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQSGKTMQ SLPDTLSSLK GFNKYLTPSW IESVSHILKE LTPTKPQKVM EEEAQNVFEC DDTELDIKVA KIQDEMVSLG AQLKQKTLQK RESLNNYLDL
101: KGSIRVFCRM RPFNHEESYS SRTMFTLDES NVFLKVAETK TKQYKFDKVF DPCSTQGDVF SEVEPVIKSA IDGYNVCIFA YGQTGSGKTY TMEGKPKDLG
201: VIPRGIQVLF DRASESNSRF QFTFSMLEIY MGNLRDLLVP GSKTNGLKNV PSLSIKTDPD GGIEIENLVA VTVNNFQEVK RLYGVGTRLR STASTMANST
301: SSRSHCLIRI SLTSFDAPER KKARNKIWMI DLGGSERLVK TKATGKRLKE GKAINLSLSA LGDVIDALQT KKPHVPYRNS KLTQVLRDSL GCESKTLMLV
401: HIRPNENDLC ETVCTLGFAT RVISIRLESE ESPEVKTRKE DFLKELEQTA SNLEQECDNI RREIKKLEDT VEHLRGPQTS ASTNFATSHP STQELKIDMS
501: KNVRSLKNHR EVPRGLPRFM KPTAASQHRI GLNNNVPSIN RMKPPMPPKR RPSSVYAESV RFPVNADTWQ SECSSECSIS MTSGMNWTPS ILDGTECSQD
601: ASEYEIKQVI FSEHEKPSQG QVISFKEWQL TESENMQNKT EERSIIDIDN WIHQQILQSA GTCQSKRVLT VPNVTEEETF NIPSPIKTEG PKGCKQAQDE
701: KSELTLQPPP LDAKDIKRPK AVNHFATEEL CSPPSREHRS TNETKKHMNE NLAYQGRSRR SLQEKLDGCM LKLPESDLNT SPETRPREEE HSIGKLKRFF
801: QALQTAWGCV RLGLGIVNLG LEHEFFQSLI V
101: KGSIRVFCRM RPFNHEESYS SRTMFTLDES NVFLKVAETK TKQYKFDKVF DPCSTQGDVF SEVEPVIKSA IDGYNVCIFA YGQTGSGKTY TMEGKPKDLG
201: VIPRGIQVLF DRASESNSRF QFTFSMLEIY MGNLRDLLVP GSKTNGLKNV PSLSIKTDPD GGIEIENLVA VTVNNFQEVK RLYGVGTRLR STASTMANST
301: SSRSHCLIRI SLTSFDAPER KKARNKIWMI DLGGSERLVK TKATGKRLKE GKAINLSLSA LGDVIDALQT KKPHVPYRNS KLTQVLRDSL GCESKTLMLV
401: HIRPNENDLC ETVCTLGFAT RVISIRLESE ESPEVKTRKE DFLKELEQTA SNLEQECDNI RREIKKLEDT VEHLRGPQTS ASTNFATSHP STQELKIDMS
501: KNVRSLKNHR EVPRGLPRFM KPTAASQHRI GLNNNVPSIN RMKPPMPPKR RPSSVYAESV RFPVNADTWQ SECSSECSIS MTSGMNWTPS ILDGTECSQD
601: ASEYEIKQVI FSEHEKPSQG QVISFKEWQL TESENMQNKT EERSIIDIDN WIHQQILQSA GTCQSKRVLT VPNVTEEETF NIPSPIKTEG PKGCKQAQDE
701: KSELTLQPPP LDAKDIKRPK AVNHFATEEL CSPPSREHRS TNETKKHMNE NLAYQGRSRR SLQEKLDGCM LKLPESDLNT SPETRPREEE HSIGKLKRFF
801: QALQTAWGCV RLGLGIVNLG LEHEFFQSLI V
001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK
Arabidopsis Description
KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.