Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010432.1-P | |
| Bra026415.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G55550.1 | Bra010432.1-P | AT4G26630.1 | 25387881 |
| AT1G55550.1 | Bra026415.1-P | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56014 | Canola | nucleus | 89.08 | 88.76 |
| CDY10550 | Canola | cytosol | 88.84 | 88.41 |
| PGSC0003DMT400046268 | Potato | mitochondrion | 11.16 | 71.54 |
| Bra038000.1-P | Field mustard | cytosol | 53.18 | 59.3 |
| Solyc01g049830.2.1 | Tomato | mitochondrion | 8.76 | 56.59 |
| AT1G55550.1 | Thale cress | cytosol | 53.66 | 52.04 |
| VIT_06s0004g00050.t01 | Wine grape | cytosol | 19.21 | 51.45 |
| Os01t0260100-01 | Rice | cytosol | 10.2 | 43.37 |
| HORVU3Hr1G036020.11 | Barley | cytosol | 24.01 | 37.04 |
| OQU86633 | Sorghum | cytosol | 35.17 | 35.56 |
| Zm00001d040312_P007 | Maize | cytosol | 34.81 | 34.69 |
| TraesCS3A01G177700.1 | Wheat | cytosol | 34.33 | 34.42 |
| TraesCS3B01G207300.1 | Wheat | cytosol | 34.09 | 34.18 |
| TraesCS3D01G183100.2 | Wheat | cytosol | 34.09 | 34.18 |
| GSMUA_Achr8P21500_001 | Banana | cytosol | 34.45 | 32.14 |
| Bra009980.1-P | Field mustard | cytosol | 23.53 | 31.06 |
| Bra024387.1-P | Field mustard | cytosol | 19.09 | 12.6 |
Protein Annotations
| MapMan:20.1.3.12 | Gene3D:3.40.850.10 | EnsemblPlantsGene:Bra030851 | EnsemblPlants:Bra030851.1 | EnsemblPlants:Bra030851.1-P | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 | InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf |
| UniProt:M4EPY0 | InterPro:P-loop_NTPase | PFAM:PF00225 | PRINTS:PR00380 | PFscan:PS50067 | PANTHER:PTHR24115 |
| PANTHER:PTHR24115:SF391 | SMART:SM00129 | SUPFAM:SSF52540 | UniParc:UPI0002547062 | SEG:seg | : |
Description
AT1G55550 (E=2e-262) | ATP binding / microtubule motor
Coordinates
chrA08:-:293466..297213
Molecular Weight (calculated)
93732.5 Da
IEP (calculated)
8.841
GRAVY (calculated)
-0.572
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTRSKRVQ NLPETVHSLI GLRSHLTSSW VKSVSNIAKN VSSSSEISST SKEEDDSAFI EEQSIRNQLS TLTVQVNDQN KRRRQILNEF LDLKGNIRVF
101: CRVKPLDSKN MRAPVASDTR NVFIKLTESK RKTYNFDRVF QPDSSQDDVF LEIEPVIKSV MDGYNACIFA YGQTGTGKTF TMEGLPESPG IVPRAIKGLF
201: KQVEESNHKF VIKFSMLEIY MGNLRDLLVS QGTKPIGPIP PSLLIHTNPK GEIGIENLVT RKVKDFDEVF KLYKLGCRNR ATAFTNSNSA SSRSHCMIRV
301: SITCAGATER RRVRNKIWLV DLGGSERVLK TKATGRRFDE GKAINLSLSA LGDVINSLQR KNAHIPYRNS KLTQVLKDSL GQDSKTLMLV HIGRKEDDLC
401: ETICSLDFAT RAKNVHLGQE ESKEKQEKKE TVMMNLQKTL ETIEKDREAT LKEIRYLNET LEKLSGKPHV TEEAEEVDEI REEIQVTPKL RRNKSRRASD
501: VFCSFMRPTA SSNRRLSGAD FSPISSGPGS KSRRNSMAHV RSESVCLPMM KNVYDSLCDS SERSVSKSTC AMSQNRADDA ATVYSQDISE CDIKLVVSEH
601: KTEVQQTGQG SARKACSKIG IFEKNVNRKT EFSRINSWLR SQSENRSCVL DKKPRRLNKN ISLGRSSNGD QTSEDIEESK AGIKHPLLLK DVFELEYMCS
701: AETEDQILSI YPNPNEEDYA SLHHLPSFRY DGLSQHIDDA WFGVARSANR EQDSHASGLL LELKQPLPNS QKGLAFVEDV APPLLRPQGI LVERGRGAHT
801: FMQELEALCY RTLVGVGLID VSYGSDFFNG LTQ
101: CRVKPLDSKN MRAPVASDTR NVFIKLTESK RKTYNFDRVF QPDSSQDDVF LEIEPVIKSV MDGYNACIFA YGQTGTGKTF TMEGLPESPG IVPRAIKGLF
201: KQVEESNHKF VIKFSMLEIY MGNLRDLLVS QGTKPIGPIP PSLLIHTNPK GEIGIENLVT RKVKDFDEVF KLYKLGCRNR ATAFTNSNSA SSRSHCMIRV
301: SITCAGATER RRVRNKIWLV DLGGSERVLK TKATGRRFDE GKAINLSLSA LGDVINSLQR KNAHIPYRNS KLTQVLKDSL GQDSKTLMLV HIGRKEDDLC
401: ETICSLDFAT RAKNVHLGQE ESKEKQEKKE TVMMNLQKTL ETIEKDREAT LKEIRYLNET LEKLSGKPHV TEEAEEVDEI REEIQVTPKL RRNKSRRASD
501: VFCSFMRPTA SSNRRLSGAD FSPISSGPGS KSRRNSMAHV RSESVCLPMM KNVYDSLCDS SERSVSKSTC AMSQNRADDA ATVYSQDISE CDIKLVVSEH
601: KTEVQQTGQG SARKACSKIG IFEKNVNRKT EFSRINSWLR SQSENRSCVL DKKPRRLNKN ISLGRSSNGD QTSEDIEESK AGIKHPLLLK DVFELEYMCS
701: AETEDQILSI YPNPNEEDYA SLHHLPSFRY DGLSQHIDDA WFGVARSANR EQDSHASGLL LELKQPLPNS QKGLAFVEDV APPLLRPQGI LVERGRGAHT
801: FMQELEALCY RTLVGVGLID VSYGSDFFNG LTQ
001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK
Arabidopsis Description
KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.