Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr9P09250_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G55550.1 | GSMUA_Achr9P09250_001 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046268 | Potato | mitochondrion | 9.74 | 66.92 |
| Solyc01g049830.2.1 | Tomato | mitochondrion | 8.17 | 56.59 |
| HORVU3Hr1G036020.11 | Barley | cytosol | 27.1 | 44.81 |
| Os01t0260100-01 | Rice | cytosol | 9.18 | 41.84 |
| TraesCS3B01G207300.1 | Wheat | cytosol | 38.41 | 41.28 |
| TraesCS3A01G177700.1 | Wheat | cytosol | 38.07 | 40.91 |
| TraesCS3D01G183100.2 | Wheat | cytosol | 37.96 | 40.79 |
| Zm00001d040312_P007 | Maize | cytosol | 37.18 | 39.71 |
| OQU86633 | Sorghum | cytosol | 36.62 | 39.68 |
| GSMUA_Achr3P23870_001 | Banana | cytosol | 15.57 | 38.29 |
| CDY54364 | Canola | cytosol | 32.14 | 36.24 |
| CDY50030 | Canola | cytosol | 31.91 | 35.94 |
| AT1G55550.1 | Thale cress | cytosol | 33.82 | 35.16 |
| CDY56014 | Canola | nucleus | 32.36 | 34.57 |
| Bra030851.1-P | Field mustard | nucleus | 32.14 | 34.45 |
| CDY10550 | Canola | cytosol | 32.14 | 34.29 |
| GSMUA_Achr8P06780_001 | Banana | cytosol | 22.96 | 33.88 |
| Bra038000.1-P | Field mustard | cytosol | 27.88 | 33.33 |
| GSMUA_Achr3P23860_001 | Banana | cytosol | 5.71 | 19.84 |
| GSMUA_Achr8P23390_001 | Banana | cytosol | 18.48 | 12.79 |
Protein Annotations
| Gene3D:3.40.850.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr8G21500_001 | EnsemblPlants:GSMUA_Achr8P21500_001 | EnsemblPlants:GSMUA_Achr8T21500_001 |
| InterPro:IPR001752 | InterPro:IPR036961 | InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | UniProt:M0TSF3 |
| InterPro:P-loop_NTPase | PFAM:PF00225 | PRINTS:PR00380 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF391 |
| SMART:SM00129 | SUPFAM:SSF52540 | UniParc:UPI0002954F4B | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G21500_001]
Coordinates
chr8:-:26368847..26375012
Molecular Weight (calculated)
100684.0 Da
IEP (calculated)
8.213
GRAVY (calculated)
-0.485
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEKMNRDCD ESNNNLCVSK IQDALASLTV QLKELSIRRR QALNDFLVLK GNIRVFCRVR PFLPDEICGY ARRVLTSDTT KLFLRIADDK NKQYSFDKVF
101: HPQSTQEEVF SEIEPVIKSA LDGYNVCIFA YGQTGTGKTY SMVREGVPSN LGLVPRGIRA IFEQALESNY TFQFTFSMLE IYMGTLRDLL VPQSTKQRVH
201: KAWQITVAII LLERQHLVPM LDLWRFLSQW QEKNPCSRPY MLRLTALSLL SCLTYNSIAE KKSNLHLSIQ MNSLGGIEIE NLVSIKVSNF EQVKRLYNLG
301: SRSRSTASTK SNLKSSRSHC LTCISLTCSA APERQKETNK IWMVDLGGSE RLLKTQATGR RLEEGKAINL SLSALGDVIS ALQHKKNHVP YRNSKLTQVL
401: RDSLGSDSKT LMFVHVSPKE EDLCETICSL GFATRVRSIH LESEKSPELQ AKKEVEMAKL QQTITELESE QKDVQRETGR LNERLTLLTG FDQSNDVHAK
501: GSLTVTGDLH FNGEVDLHNA KGFKRTSPSL PRFMKPTICS KQKTGSVHLS STGTRKKSAI PSNMKRSASV YAESITSQAK DTACLSDYGS DFSMSTGYAI
601: QGHGADDDTE CSQGTSEYEI KQVIFPEQEK SPRSSMTSLH DGCFNNGSLK VKEINKNKHF TEDWLHLQTT GQTRTHNVGG KRIFAIPVDK RNIMCKQQNR
701: VIYCNQAEIQ NFRKRNSGTT KKTNLNGVDS LKSIVLDEAR RFIVCSLTDM EDTQLDQNQD HDQVAAERTG GQVQEDLTVV TVLTETPGFR ENPISVDSYS
801: EDCSRPEQQE NKEESCMLFR TPRRSLFATH SLQPDQHTDL KESMIHITSC HDEEHGTNGL FLKTIQRLWA SVLLGLGIQS LGLGCDFFHG LLH
101: HPQSTQEEVF SEIEPVIKSA LDGYNVCIFA YGQTGTGKTY SMVREGVPSN LGLVPRGIRA IFEQALESNY TFQFTFSMLE IYMGTLRDLL VPQSTKQRVH
201: KAWQITVAII LLERQHLVPM LDLWRFLSQW QEKNPCSRPY MLRLTALSLL SCLTYNSIAE KKSNLHLSIQ MNSLGGIEIE NLVSIKVSNF EQVKRLYNLG
301: SRSRSTASTK SNLKSSRSHC LTCISLTCSA APERQKETNK IWMVDLGGSE RLLKTQATGR RLEEGKAINL SLSALGDVIS ALQHKKNHVP YRNSKLTQVL
401: RDSLGSDSKT LMFVHVSPKE EDLCETICSL GFATRVRSIH LESEKSPELQ AKKEVEMAKL QQTITELESE QKDVQRETGR LNERLTLLTG FDQSNDVHAK
501: GSLTVTGDLH FNGEVDLHNA KGFKRTSPSL PRFMKPTICS KQKTGSVHLS STGTRKKSAI PSNMKRSASV YAESITSQAK DTACLSDYGS DFSMSTGYAI
601: QGHGADDDTE CSQGTSEYEI KQVIFPEQEK SPRSSMTSLH DGCFNNGSLK VKEINKNKHF TEDWLHLQTT GQTRTHNVGG KRIFAIPVDK RNIMCKQQNR
701: VIYCNQAEIQ NFRKRNSGTT KKTNLNGVDS LKSIVLDEAR RFIVCSLTDM EDTQLDQNQD HDQVAAERTG GQVQEDLTVV TVLTETPGFR ENPISVDSYS
801: EDCSRPEQQE NKEESCMLFR TPRRSLFATH SLQPDQHTDL KESMIHITSC HDEEHGTNGL FLKTIQRLWA SVLLGLGIQS LGLGCDFFHG LLH
001: MLISAEKGEI LIPQSPLSSE SVVPLVYTDV NVVPEHESNQ LEKSISNLEE EVFELKLKLK SLDEKRKQVL NKIIDTKGSI RVFCRVRPFL LTERRPIREP
101: VSFGPDNVVI RSAGSSKEFE FDKVFHQSAT QEEVFGEVKP ILRSALDGHN VCVLAYGQTG TGKTFTMDGT SEQPGLAPRA IKELFNEASM DQTHSVTFRM
201: SMLEIYMGNL KDLLSARQSL KSYEASAKCN LNIQVDSKGS VEIEGLTEVE VMDFTKARWW YNKGRRVRST SWTNVNETSS RSHCLTRITI FRRGDAVGSK
301: TEVSKLWMID LGGSERLLKT GAIGQTMDEG RAINLSLSAL GDVIAALRRK KGHVPYRNSK LTQILKDSLG TRSKVLMLVH ISPRDEDVGE TICSLSFTKR
401: ARAVESNRGL TAELQKLREK KISELEEEME ETQEGCKKIK ARLQEVECLV NEHKKLFWIT NDKYLEDIEK KAISPLDHLK DTDATPISSD KLVKIRKSSG
501: FVPRFMTSTV ASRQRQTMSE KEINAKAQSI RSVAKNLTQF STSQSLSLSD SRSKALLRRS YTKPLQAAAN SGTPPETPKR HIKDNSLQRK NMNDTSSPRS
601: KMVTSSDPNV RAKLCHHKRR MSSLT
101: VSFGPDNVVI RSAGSSKEFE FDKVFHQSAT QEEVFGEVKP ILRSALDGHN VCVLAYGQTG TGKTFTMDGT SEQPGLAPRA IKELFNEASM DQTHSVTFRM
201: SMLEIYMGNL KDLLSARQSL KSYEASAKCN LNIQVDSKGS VEIEGLTEVE VMDFTKARWW YNKGRRVRST SWTNVNETSS RSHCLTRITI FRRGDAVGSK
301: TEVSKLWMID LGGSERLLKT GAIGQTMDEG RAINLSLSAL GDVIAALRRK KGHVPYRNSK LTQILKDSLG TRSKVLMLVH ISPRDEDVGE TICSLSFTKR
401: ARAVESNRGL TAELQKLREK KISELEEEME ETQEGCKKIK ARLQEVECLV NEHKKLFWIT NDKYLEDIEK KAISPLDHLK DTDATPISSD KLVKIRKSSG
501: FVPRFMTSTV ASRQRQTMSE KEINAKAQSI RSVAKNLTQF STSQSLSLSD SRSKALLRRS YTKPLQAAAN SGTPPETPKR HIKDNSLQRK NMNDTSSPRS
601: KMVTSSDPNV RAKLCHHKRR MSSLT
Arabidopsis Description
KIN14UKinesin-like protein KIN-14U [Source:UniProtKB/Swiss-Prot;Acc:Q8W0Y9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.