CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55550.1	CDX89318	AT4G26630.1	25387881
AT1G55550.1	CDX94304	AT4G26630.1	25387881
AT1G55550.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50030	Canola	cytosol	82.95	82.85
PGSC0003DMT400046268	Potato	mitochondrion	11.87	72.31
CDY10550	Canola	cytosol	67.8	64.16
CDY56014	Canola	nucleus	66.92	63.4
AT1G55550.1	Thale cress	cytosol	64.14	59.14
Solyc01g049830.2.1	Tomato	mitochondrion	9.47	58.14
VIT_06s0004g00050.t01	Wine grape	cytosol	20.96	53.38
Os01t0260100-01	Rice	cytosol	10.98	44.39
HORVU3Hr1G036020.11	Barley	cytosol	25.76	37.78
OQU86633	Sorghum	cytosol	37.5	36.04
Zm00001d040312_P007	Maize	cytosol	37.5	35.53
TraesCS3B01G207300.1	Wheat	cytosol	37.25	35.5
TraesCS3A01G177700.1	Wheat	cytosol	37.25	35.5
TraesCS3D01G183100.2	Wheat	cytosol	36.99	35.26
CDX86181	Canola	cytosol	25.63	33.17
GSMUA_Achr8P21500_001	Banana	cytosol	36.24	32.14
CDX80676	Canola	cytosol	25.38	32.01
CDY14565	Canola	cytosol	18.81	11.77
CDX78382	Canola	cytosol	18.56	11.71
CDX81180	Canola	cytosol	18.56	11.69
CDY08791	Canola	cytosol	18.43	11.57

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078IYE3	UniProt:A0A078IYE3	EnsemblPlants:CDY54364	ProteinID:CDY54364
ProteinID:CDY54364.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00013943001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF391	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EE5E7F
SEG:seg	:	:	:	:	:

Description

BnaC06g07280DBnaC06g07280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYE3]

Coordinates

chrLK033309:-:56631..60276

Molecular Weight (calculated)

88756.0 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.561

Length

792 amino acids

Sequence
(BLAST)

001: METRRSKPVK NLPETIHSLL GTKSHLTSAW VKSVCNIVKN VSSSEIASTS KEEDDSAFIQ VQSIRDQLSA LTVEANEQNK RRRQILNEFL DLKGNIRVFC
101: RVKPIDSKNM RAPVTSDTRN VIIKLTESKR KTYNFDRVFQ PDSSQDDVFL EIEPVIKSVI DGYNACIFAY GQTGTGKTFT MEGLPESPGI VPRAIKGLFK
201: QVEQSNHKFV IKFSMLEIYM GNLRDLLVSQ GTKPIGPIPP SLLIHTDAKG EIDIENLATL KVNDFDEVFK LYKLGCRYRA TASTNSNSAS SRSHCMIKVS
301: ITCAGAPERR RETNKIWLVD LGGSERVLKT KATGRRFDEG KAINLSLSAL GDVINSLQRK NPHIPYRNSK LTQVLKDSLG QDSKTLMLVH VSRKEDDLCE
401: TICSLNFATR AKNIHLGQDE SKEEQEKKEA VMINLQKMME KIEQERETAL KEIRSLNETL EKLTGKPHVT EEAEVDEIRE EIQVTPKLKR NKSRRASDVF
501: PSFMRPTASS SSRRLSGTDF SVISHGPGPK SRRNSMISVR AESVCLPMKK NGFDSVGDSS ERSVSKSTCV MRADDAATVD SQDISECDIK LVVSEHKPQV
601: QHLGHGSAKK PSSSKMDGTE FSRVNSWLHS QSANRSYLLD KKQLPATPSP VKARSLSRNR SLENSSTKLE DIEEYRTEDT GIKPTPMLKD LFELQCLCSS
701: ETEDQILSKY PNPDNHDNNV WEQGSLKPRS QRGLAFPEDI APPLRRPQVI LGERGRAQTF IQKLHALCLC IVMALGFIDV GYGNDFFNGL TK

Best Arabidopsis Sequence Match ( AT1G55550.1 )
(BLAST)

001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK

Arabidopsis Description

KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.